Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 AC006557.6-201ENST00000623071 864 ntBASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 AC092368.3-202ENST00000574180 1591 ntBASIC26.63■■□□□ 1.85
CCDC146Q8IYE0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC26.62■■□□□ 1.85
CCDC146Q8IYE0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC146Q8IYE0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC146Q8IYE0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC146Q8IYE0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC146Q8IYE0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.62■■□□□ 1.85
CCDC146Q8IYE0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC146Q8IYE0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC146Q8IYE0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC146Q8IYE0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC26.62■■□□□ 1.85
CCDC146Q8IYE0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC146Q8IYE0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC146Q8IYE0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC146Q8IYE0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC26.61■■□□□ 1.85
CCDC146Q8IYE0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CCDC146Q8IYE0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC26.61■■□□□ 1.85
CCDC146Q8IYE0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.61■■□□□ 1.85
CCDC146Q8IYE0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC146Q8IYE0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC146Q8IYE0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.61■■□□□ 1.85
CCDC146Q8IYE0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC26.61■■□□□ 1.85
CCDC146Q8IYE0 MIR4651-201ENST00000582622 73 ntBASIC26.61■■□□□ 1.85
CCDC146Q8IYE0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC26.61■■□□□ 1.85
CCDC146Q8IYE0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC26.61■■□□□ 1.85
CCDC146Q8IYE0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC26.61■■□□□ 1.85
CCDC146Q8IYE0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC146Q8IYE0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 PNMA6B-201ENST00000538162 1200 ntBASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 HLA-B-256ENST00000639848 1089 ntBASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC26.6■■□□□ 1.85
CCDC146Q8IYE0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 AC060766.5-201ENST00000590539 871 ntBASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC146Q8IYE0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC146Q8IYE0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC146Q8IYE0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC146Q8IYE0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.58■■□□□ 1.85
CCDC146Q8IYE0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC146Q8IYE0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
CCDC146Q8IYE0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC146Q8IYE0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.58■■□□□ 1.85
CCDC146Q8IYE0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.58■■□□□ 1.85
CCDC146Q8IYE0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC146Q8IYE0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC146Q8IYE0 KRT8P17-201ENST00000453110 1448 ntBASIC26.57■■□□□ 1.84
CCDC146Q8IYE0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC26.57■■□□□ 1.84
CCDC146Q8IYE0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
CCDC146Q8IYE0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC26.57■■□□□ 1.84
CCDC146Q8IYE0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC146Q8IYE0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.57■■□□□ 1.84
CCDC146Q8IYE0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC146Q8IYE0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
CCDC146Q8IYE0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms