Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 AC011484.1-201ENST00000377652 1995 ntBASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 AP006587.3-201ENST00000525742 1516 ntBASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD2Q8IV50 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 AL691432.2-201ENST00000607222 2038 ntBASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LYSMD2Q8IV50 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 NOC2LP2-201ENST00000407594 1944 ntBASIC17.59■□□□□ 0.41
LYSMD2Q8IV50 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.58■□□□□ 0.41
LYSMD2Q8IV50 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
LYSMD2Q8IV50 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LYSMD2Q8IV50 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LYSMD2Q8IV50 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.58■□□□□ 0.4
LYSMD2Q8IV50 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
LYSMD2Q8IV50 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD2Q8IV50 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
LYSMD2Q8IV50 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD2Q8IV50 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.58■□□□□ 0.4
LYSMD2Q8IV50 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD2Q8IV50 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD2Q8IV50 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
LYSMD2Q8IV50 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
LYSMD2Q8IV50 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD2Q8IV50 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms