Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CCDC92B-201ENST00000575506 885 ntBASIC18.1■□□□□ 0.49
SHFQ7M4L6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.1■□□□□ 0.49
SHFQ7M4L6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHFQ7M4L6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHFQ7M4L6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHFQ7M4L6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHFQ7M4L6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.1■□□□□ 0.49
SHFQ7M4L6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.09■□□□□ 0.49
SHFQ7M4L6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
SHFQ7M4L6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SHFQ7M4L6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHFQ7M4L6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHFQ7M4L6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHFQ7M4L6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHFQ7M4L6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHFQ7M4L6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHFQ7M4L6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHFQ7M4L6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.09■□□□□ 0.49
SHFQ7M4L6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.09■□□□□ 0.49
SHFQ7M4L6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.09■□□□□ 0.49
SHFQ7M4L6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHFQ7M4L6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHFQ7M4L6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.09■□□□□ 0.49
SHFQ7M4L6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHFQ7M4L6 AC120498.9-201ENST00000339021 3867 ntBASIC18.09■□□□□ 0.49
SHFQ7M4L6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHFQ7M4L6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHFQ7M4L6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHFQ7M4L6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHFQ7M4L6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.08■□□□□ 0.49
SHFQ7M4L6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.08■□□□□ 0.49
SHFQ7M4L6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHFQ7M4L6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHFQ7M4L6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.08■□□□□ 0.48
SHFQ7M4L6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHFQ7M4L6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHFQ7M4L6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHFQ7M4L6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SHFQ7M4L6 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.08■□□□□ 0.48
SHFQ7M4L6 SLC7A5P2-201ENST00000553010 536 ntBASIC18.08■□□□□ 0.48
SHFQ7M4L6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.08■□□□□ 0.48
SHFQ7M4L6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.08■□□□□ 0.48
SHFQ7M4L6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.08■□□□□ 0.48
SHFQ7M4L6 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.08■□□□□ 0.48
SHFQ7M4L6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHFQ7M4L6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.08■□□□□ 0.48
SHFQ7M4L6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SHFQ7M4L6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SHFQ7M4L6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SHFQ7M4L6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SHFQ7M4L6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHFQ7M4L6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHFQ7M4L6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.07■□□□□ 0.48
SHFQ7M4L6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHFQ7M4L6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SHFQ7M4L6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHFQ7M4L6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.07■□□□□ 0.48
SHFQ7M4L6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHFQ7M4L6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.07■□□□□ 0.48
SHFQ7M4L6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHFQ7M4L6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHFQ7M4L6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHFQ7M4L6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.07■□□□□ 0.48
SHFQ7M4L6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SHFQ7M4L6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.07■□□□□ 0.48
SHFQ7M4L6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.07■□□□□ 0.48
SHFQ7M4L6 TERF1P2-201ENST00000583350 1212 ntBASIC18.07■□□□□ 0.48
SHFQ7M4L6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SHFQ7M4L6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHFQ7M4L6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHFQ7M4L6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHFQ7M4L6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SHFQ7M4L6 AC004408.2-201ENST00000623613 2777 ntBASIC18.07■□□□□ 0.48
SHFQ7M4L6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SHFQ7M4L6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.06■□□□□ 0.48
SHFQ7M4L6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.06■□□□□ 0.48
SHFQ7M4L6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.06■□□□□ 0.48
SHFQ7M4L6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SHFQ7M4L6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.06■□□□□ 0.48
SHFQ7M4L6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.06■□□□□ 0.48
SHFQ7M4L6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.06■□□□□ 0.48
SHFQ7M4L6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.06■□□□□ 0.48
SHFQ7M4L6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 YBX1P1-201ENST00000445822 960 ntBASIC18.06■□□□□ 0.48
SHFQ7M4L6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SHFQ7M4L6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.06■□□□□ 0.48
SHFQ7M4L6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.06■□□□□ 0.48
SHFQ7M4L6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.06■□□□□ 0.48
SHFQ7M4L6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHFQ7M4L6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms