Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.44■□□□□ 0.54
TUBA1AQ71U36 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.44■□□□□ 0.54
TUBA1AQ71U36 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TUBA1AQ71U36 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBA1AQ71U36 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.44■□□□□ 0.54
TUBA1AQ71U36 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBA1AQ71U36 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TUBA1AQ71U36 AC004911.1-201ENST00000416316 871 ntBASIC18.44■□□□□ 0.54
TUBA1AQ71U36 AC010141.2-201ENST00000452426 721 ntBASIC18.44■□□□□ 0.54
TUBA1AQ71U36 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBA1AQ71U36 AC138907.5-202ENST00000569484 235 ntBASIC18.44■□□□□ 0.54
TUBA1AQ71U36 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBA1AQ71U36 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBA1AQ71U36 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBA1AQ71U36 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBA1AQ71U36 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBA1AQ71U36 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 TCF3P1-201ENST00000423021 1937 ntBASIC18.43■□□□□ 0.54
TUBA1AQ71U36 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 UBE2DNL-204ENST00000602536 740 ntBASIC18.43■□□□□ 0.54
TUBA1AQ71U36 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBA1AQ71U36 AC061975.6-201ENST00000579045 1553 ntBASIC18.42■□□□□ 0.54
TUBA1AQ71U36 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 SLC7A5P2-201ENST00000553010 536 ntBASIC18.42■□□□□ 0.54
TUBA1AQ71U36 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBA1AQ71U36 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.41■□□□□ 0.54
TUBA1AQ71U36 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
TUBA1AQ71U36 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TUBA1AQ71U36 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TUBA1AQ71U36 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TUBA1AQ71U36 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms