Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 AC105020.6-201ENST00000621523 1217 ntBASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NHLRC1Q6VVB1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
NHLRC1Q6VVB1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NHLRC1Q6VVB1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NHLRC1Q6VVB1 KRT17P1-201ENST00000399211 1546 ntBASIC18.02■□□□□ 0.47
NHLRC1Q6VVB1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
NHLRC1Q6VVB1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.02■□□□□ 0.47
NHLRC1Q6VVB1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NHLRC1Q6VVB1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NHLRC1Q6VVB1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
NHLRC1Q6VVB1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
NHLRC1Q6VVB1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.02■□□□□ 0.47
NHLRC1Q6VVB1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
NHLRC1Q6VVB1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 PTBP1P-201ENST00000554374 1601 ntBASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 SMG8-203ENST00000578922 2178 ntBASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NHLRC1Q6VVB1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 MIR663A-201ENST00000385250 93 ntBASIC18■□□□□ 0.47
NHLRC1Q6VVB1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 PPP1R14BP3-201ENST00000509033 445 ntBASIC18■□□□□ 0.47
NHLRC1Q6VVB1 AF201337.1-201ENST00000520239 748 ntBASIC18■□□□□ 0.47
NHLRC1Q6VVB1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 AFG3L1P-217ENST00000557444 2447 ntBASIC18■□□□□ 0.47
NHLRC1Q6VVB1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NHLRC1Q6VVB1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 PCDHAC2-203ENST00000615316 3011 ntBASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 NCF1B-203ENST00000435988 1254 ntBASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 GUSBP6-202ENST00000438529 1198 ntBASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 AC105036.2-201ENST00000569468 176 ntBASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 DPP3P2-201ENST00000416030 1696 ntBASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.99■□□□□ 0.47
NHLRC1Q6VVB1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 AC087289.5-201ENST00000586076 3175 ntBASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 AC083906.2-201ENST00000511578 360 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms