Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFI1BQ5VTD9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFI1BQ5VTD9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
GFI1BQ5VTD9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.64■□□□□ 0.1
GFI1BQ5VTD9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 AP001330.3-201ENST00000520123 633 ntBASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 TSPY26P-201ENST00000476365 1326 ntBASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
GFI1BQ5VTD9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 EDA-201ENST00000338901 1233 ntBASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 AC110285.6-201ENST00000617652 491 ntBASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFI1BQ5VTD9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms