Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 MFSD11-216ENST00000590393 1141 ntBASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 AC011767.1-201ENST00000617410 1153 ntBASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 BID-214ENST00000617586 542 ntTSL 5 BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 AC010536.3-201ENST00000620306 533 ntBASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 TERF1P5-201ENST00000477545 1207 ntBASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 IKBKGP1-201ENST00000612193 1073 ntBASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATPAF1Q5TC12 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 AL137784.2-201ENST00000607332 1000 ntBASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.35■□□□□ 0.37
ATPAF1Q5TC12 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 DUX4L16-201ENST00000555130 1264 ntBASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.34■□□□□ 0.37
ATPAF1Q5TC12 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATPAF1Q5TC12 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATPAF1Q5TC12 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
ATPAF1Q5TC12 TCF3P1-201ENST00000423021 1937 ntBASIC17.33■□□□□ 0.37
ATPAF1Q5TC12 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATPAF1Q5TC12 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms