Protein–RNA interactions for Protein: Q00723

PRP38, Pre-mRNA-splicing factor 38, yeastyeast

Predicted RBP Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP38Q00723 NUP188YML103C 4968 nt1.12□□□□□ -2.23
PRP38Q00723 NIP100YPL174C 2607 nt1.12□□□□□ -2.23
PRP38Q00723 Q0142Q0142 177 nt1.12□□□□□ -2.23
PRP38Q00723 MPT5YGL178W 2580 nt1.12□□□□□ -2.23
PRP38Q00723 COG4YPR105C 2586 nt1.12□□□□□ -2.23
PRP38Q00723 SIP4YJL089W 2490 nt1.12□□□□□ -2.23
PRP38Q00723 LCD1YDR499W 2244 nt1.12□□□□□ -2.23
PRP38Q00723 TAR1YLR154W-C 375 nt1.11□□□□□ -2.23
PRP38Q00723 NST1YNL091W 3723 nt1.11□□□□□ -2.23
PRP38Q00723 SPT21YMR179W 2277 nt1.1□□□□□ -2.23
PRP38Q00723 SEC3YER008C 4011 nt1.1□□□□□ -2.23
PRP38Q00723 YBL008W-AYBL008W-A 240 nt1.1□□□□□ -2.23
PRP38Q00723 AIM44YPL158C 2277 nt1.09□□□□□ -2.23
PRP38Q00723 YJR011CYJR011C 786 nt1.09□□□□□ -2.23
PRP38Q00723 YOR161W-BYOR161W-B 261 nt1.09□□□□□ -2.23
PRP38Q00723 snR36snR36 182 nt1.09□□□□□ -2.23
PRP38Q00723 YJR029WYJR029W 5268 nt1.09□□□□□ -2.24
PRP38Q00723 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.24
PRP38Q00723 SPT7YBR081C 3999 nt1.08□□□□□ -2.24
PRP38Q00723 PKH2YOL100W 3246 nt1.08□□□□□ -2.24
PRP38Q00723 FIG4YNL325C 2640 nt1.08□□□□□ -2.24
PRP38Q00723 CUL3YGR003W 2235 nt1.07□□□□□ -2.24
PRP38Q00723 SWI4YER111C 3282 nt1.07□□□□□ -2.24
PRP38Q00723 SLD3YGL113W 2007 nt1.07□□□□□ -2.24
PRP38Q00723 NHP2YDL208W 471 nt1.07□□□□□ -2.24
PRP38Q00723 RPL34BYIL052C 366 nt1.07□□□□□ -2.24
PRP38Q00723 YIR044CYIR044C 186 nt1.07□□□□□ -2.24
PRP38Q00723 YKL118WYKL118W 312 nt1.07□□□□□ -2.24
PRP38Q00723 APL1YJR005W 2103 nt1.07□□□□□ -2.24
PRP38Q00723 TTI1YKL033W 3117 nt1.06□□□□□ -2.24
PRP38Q00723 OST1YJL002C 1431 nt1.06□□□□□ -2.24
PRP38Q00723 MMS4YBR098W 2076 nt1.06□□□□□ -2.24
PRP38Q00723 YKL136WYKL136W 399 nt1.06□□□□□ -2.24
PRP38Q00723 BEM2YER155C 6504 nt1.06□□□□□ -2.24
PRP38Q00723 APL3YBL037W 3078 nt1.05□□□□□ -2.24
PRP38Q00723 ALY2YJL084C 3141 nt1.05□□□□□ -2.24
PRP38Q00723 YDR413CYDR413C 576 nt1.05□□□□□ -2.24
PRP38Q00723 YFL032WYFL032W 321 nt1.05□□□□□ -2.24
PRP38Q00723 GPG1YGL121C 381 nt1.05□□□□□ -2.24
PRP38Q00723 YLL020CYLL020C 306 nt1.05□□□□□ -2.24
PRP38Q00723 YPR063CYPR063C 423 nt1.05□□□□□ -2.24
PRP38Q00723 YBR221W-AYBR221W-A 105 nt1.05□□□□□ -2.24
PRP38Q00723 SET3YKR029C 2256 nt1.05□□□□□ -2.24
PRP38Q00723 YCK3YER123W 1575 nt1.04□□□□□ -2.24
PRP38Q00723 YDL206WYDL206W 2289 nt1.04□□□□□ -2.24
PRP38Q00723 YDR183C-AYDR183C-A 258 nt1.04□□□□□ -2.24
PRP38Q00723 IFH1YLR223C 3258 nt1.04□□□□□ -2.24
PRP38Q00723 YLL007CYLL007C 1998 nt1.04□□□□□ -2.24
PRP38Q00723 CLU1YMR012W 3834 nt1.04□□□□□ -2.24
PRP38Q00723 STO1YMR125W 2586 nt1.03□□□□□ -2.24
PRP38Q00723 DBP6YNR038W 1890 nt1.03□□□□□ -2.24
PRP38Q00723 STF2YGR008C 255 nt1.03□□□□□ -2.24
PRP38Q00723 YCS4YLR272C 3531 nt1.03□□□□□ -2.24
PRP38Q00723 SSS1YDR086C 243 nt1.02□□□□□ -2.25
PRP38Q00723 YER097WYER097W 330 nt1.02□□□□□ -2.25
PRP38Q00723 PTP2YOR208W 2253 nt1.02□□□□□ -2.25
PRP38Q00723 CDC39YCR093W 6327 nt1.02□□□□□ -2.25
PRP38Q00723 PDE2YOR360C 1581 nt1.01□□□□□ -2.25
PRP38Q00723 HTL1YCR020W-B 237 nt1.01□□□□□ -2.25
PRP38Q00723 YFL063WYFL063W 456 nt1.01□□□□□ -2.25
PRP38Q00723 HUG1YML058W-A 207 nt1.01□□□□□ -2.25
PRP38Q00723 VAM6YDL077C 3150 nt1.01□□□□□ -2.25
PRP38Q00723 NUP145YGL092W 3954 nt1□□□□□ -2.25
PRP38Q00723 HMRA2YCR096C 360 nt1□□□□□ -2.25
PRP38Q00723 YDR521WYDR521W 336 nt1□□□□□ -2.25
PRP38Q00723 YBR206WYBR206W 324 nt1□□□□□ -2.25
PRP38Q00723 EAF1YDR359C 2949 nt1□□□□□ -2.25
PRP38Q00723 YAR009CYAR009C 3591 nt1□□□□□ -2.25
PRP38Q00723 STB6YKL072W 2301 nt0.99□□□□□ -2.25
PRP38Q00723 YGL149WYGL149W 306 nt0.99□□□□□ -2.25
PRP38Q00723 YIL115W-AYIL115W-A 372 nt0.99□□□□□ -2.25
PRP38Q00723 YBR200W-AYBR200W-A 165 nt0.99□□□□□ -2.25
PRP38Q00723 snR60snR60 104 nt0.98□□□□□ -2.25
PRP38Q00723 YIL032CYIL032C 357 nt0.98□□□□□ -2.25
PRP38Q00723 YMR193C-AYMR193C-A 387 nt0.98□□□□□ -2.25
PRP38Q00723 BUD3YCL014W 4911 nt0.98□□□□□ -2.25
PRP38Q00723 PAN2YGL094C 3348 nt0.97□□□□□ -2.25
PRP38Q00723 YDR344CYDR344C 444 nt0.97□□□□□ -2.25
PRP38Q00723 RPL39YJL189W 156 nt0.97□□□□□ -2.25
PRP38Q00723 RPS25BYLR333C 327 nt0.97□□□□□ -2.25
PRP38Q00723 STE5YDR103W 2754 nt0.97□□□□□ -2.25
PRP38Q00723 ROM2YLR371W 4071 nt0.97□□□□□ -2.25
PRP38Q00723 WAR1YML076C 2835 nt0.97□□□□□ -2.25
PRP38Q00723 INA22YIR024C 651 nt0.96□□□□□ -2.26
PRP38Q00723 YJL120WYJL120W 324 nt0.96□□□□□ -2.26
PRP38Q00723 SPO21YOL091W 1830 nt0.95□□□□□ -2.26
PRP38Q00723 YBR064WYBR064W 429 nt0.95□□□□□ -2.26
PRP38Q00723 GEA2YEL022W 4380 nt0.95□□□□□ -2.26
PRP38Q00723 EMT1tM(CAU)D 73 nt0.94□□□□□ -2.26
PRP38Q00723 EMT5tM(CAU)J1 73 nt0.94□□□□□ -2.26
PRP38Q00723 EMT3tM(CAU)J2 73 nt0.94□□□□□ -2.26
PRP38Q00723 EMT4tM(CAU)M 73 nt0.94□□□□□ -2.26
PRP38Q00723 EMT2tM(CAU)O2 73 nt0.94□□□□□ -2.26
PRP38Q00723 PAM16YJL104W 450 nt0.94□□□□□ -2.26
PRP38Q00723 YOR011W-AYOR011W-A 207 nt0.94□□□□□ -2.26
PRP38Q00723 ECM12YHR021W-A 456 nt0.93□□□□□ -2.26
PRP38Q00723 YMR031W-AYMR031W-A 327 nt0.93□□□□□ -2.26
PRP38Q00723 SMC1YFL008W 3678 nt0.93□□□□□ -2.26
PRP38Q00723 VIK1YPL253C 1944 nt0.93□□□□□ -2.26
PRP38Q00723 COG8YML071C 1824 nt0.92□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 21.1 ms