Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCL20P78556 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCL20P78556 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.81■□□□□ 0.12
CCL20P78556 MBP-237ENST00000579129 1052 ntTSL 5 BASIC15.81■□□□□ 0.12
CCL20P78556 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.81■□□□□ 0.12
CCL20P78556 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CCL20P78556 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.81■□□□□ 0.12
CCL20P78556 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.81■□□□□ 0.12
CCL20P78556 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.81■□□□□ 0.12
CCL20P78556 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.81■□□□□ 0.12
CCL20P78556 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.81■□□□□ 0.12
CCL20P78556 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL20P78556 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
CCL20P78556 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CCL20P78556 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL20P78556 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.8■□□□□ 0.12
CCL20P78556 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL20P78556 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCL20P78556 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.8■□□□□ 0.12
CCL20P78556 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.8■□□□□ 0.12
CCL20P78556 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL20P78556 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL20P78556 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCL20P78556 AC099791.2-201ENST00000605725 427 ntBASIC15.8■□□□□ 0.12
CCL20P78556 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 AP000997.3-201ENST00000623333 2250 ntBASIC15.8■□□□□ 0.12
CCL20P78556 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.8■□□□□ 0.12
CCL20P78556 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCL20P78556 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCL20P78556 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCL20P78556 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCL20P78556 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCL20P78556 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL20P78556 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL20P78556 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL20P78556 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL20P78556 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL20P78556 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.79■□□□□ 0.12
CCL20P78556 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.79■□□□□ 0.12
CCL20P78556 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCL20P78556 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.79■□□□□ 0.12
CCL20P78556 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CCL20P78556 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.79■□□□□ 0.12
CCL20P78556 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL20P78556 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL20P78556 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.79■□□□□ 0.12
CCL20P78556 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL20P78556 AL031848.2-201ENST00000607670 837 ntBASIC15.79■□□□□ 0.12
CCL20P78556 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL20P78556 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CCL20P78556 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL20P78556 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCL20P78556 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCL20P78556 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL20P78556 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCL20P78556 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCL20P78556 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.78■□□□□ 0.12
CCL20P78556 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCL20P78556 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.78■□□□□ 0.12
CCL20P78556 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.78■□□□□ 0.12
CCL20P78556 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.78■□□□□ 0.12
CCL20P78556 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.78■□□□□ 0.12
CCL20P78556 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.78■□□□□ 0.12
CCL20P78556 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCL20P78556 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms