Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SEC61A1P61619 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.51■□□□□ 0.39
SEC61A1P61619 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SEC61A1P61619 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.51■□□□□ 0.39
SEC61A1P61619 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.5■□□□□ 0.39
SEC61A1P61619 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC61A1P61619 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SEC61A1P61619 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC61A1P61619 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC61A1P61619 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC61A1P61619 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SEC61A1P61619 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC61A1P61619 AC026471.1-201ENST00000564629 3026 ntBASIC17.5■□□□□ 0.39
SEC61A1P61619 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC61A1P61619 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.5■□□□□ 0.39
SEC61A1P61619 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEC61A1P61619 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.5■□□□□ 0.39
SEC61A1P61619 AC008175.2-201ENST00000612840 297 ntBASIC17.5■□□□□ 0.39
SEC61A1P61619 AL050303.2-201ENST00000619798 666 ntBASIC17.5■□□□□ 0.39
SEC61A1P61619 AC006128.1-201ENST00000624704 1661 ntBASIC17.5■□□□□ 0.39
SEC61A1P61619 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC61A1P61619 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEC61A1P61619 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SEC61A1P61619 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.5■□□□□ 0.39
SEC61A1P61619 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC61A1P61619 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEC61A1P61619 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SEC61A1P61619 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEC61A1P61619 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.5■□□□□ 0.39
SEC61A1P61619 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SEC61A1P61619 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SEC61A1P61619 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SEC61A1P61619 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.49■□□□□ 0.39
SEC61A1P61619 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SEC61A1P61619 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SEC61A1P61619 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SEC61A1P61619 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.49■□□□□ 0.39
SEC61A1P61619 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 CNN2P6-201ENST00000439038 900 ntBASIC17.49■□□□□ 0.39
SEC61A1P61619 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.49■□□□□ 0.39
SEC61A1P61619 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.49■□□□□ 0.39
SEC61A1P61619 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.49■□□□□ 0.39
SEC61A1P61619 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.49■□□□□ 0.39
SEC61A1P61619 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.49■□□□□ 0.39
SEC61A1P61619 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.49■□□□□ 0.39
SEC61A1P61619 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.49■□□□□ 0.39
SEC61A1P61619 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.49■□□□□ 0.39
SEC61A1P61619 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.49■□□□□ 0.39
SEC61A1P61619 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.49■□□□□ 0.39
SEC61A1P61619 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.49■□□□□ 0.39
SEC61A1P61619 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEC61A1P61619 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SEC61A1P61619 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SEC61A1P61619 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEC61A1P61619 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEC61A1P61619 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.48■□□□□ 0.39
SEC61A1P61619 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.48■□□□□ 0.39
SEC61A1P61619 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEC61A1P61619 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEC61A1P61619 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEC61A1P61619 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEC61A1P61619 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.48■□□□□ 0.39
SEC61A1P61619 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.48■□□□□ 0.39
SEC61A1P61619 AC007322.1-201ENST00000426983 750 ntBASIC17.48■□□□□ 0.39
SEC61A1P61619 AC231657.2-201ENST00000624556 255 ntBASIC17.48■□□□□ 0.39
SEC61A1P61619 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEC61A1P61619 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.48■□□□□ 0.39
SEC61A1P61619 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEC61A1P61619 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEC61A1P61619 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEC61A1P61619 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.47■□□□□ 0.39
SEC61A1P61619 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.47■□□□□ 0.39
SEC61A1P61619 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SEC61A1P61619 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.47■□□□□ 0.39
SEC61A1P61619 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.47■□□□□ 0.39
SEC61A1P61619 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61A1P61619 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61A1P61619 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61A1P61619 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61A1P61619 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SEC61A1P61619 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61A1P61619 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SEC61A1P61619 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.47■□□□□ 0.39
SEC61A1P61619 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.47■□□□□ 0.39
SEC61A1P61619 AC005181.1-201ENST00000604782 1256 ntBASIC17.47■□□□□ 0.39
SEC61A1P61619 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms