Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC005229.4-201ENST00000610085 2198 ntBASIC19.87■□□□□ 0.77
CLDN2P57739 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN2P57739 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN2P57739 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CLDN2P57739 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN2P57739 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN2P57739 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.86■□□□□ 0.77
CLDN2P57739 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.86■□□□□ 0.77
CLDN2P57739 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.86■□□□□ 0.77
CLDN2P57739 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN2P57739 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN2P57739 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN2P57739 AL137060.1-201ENST00000618151 2648 ntBASIC19.86■□□□□ 0.77
CLDN2P57739 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN2P57739 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN2P57739 AC012618.2-201ENST00000428058 849 ntBASIC19.86■□□□□ 0.77
CLDN2P57739 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CLDN2P57739 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.86■□□□□ 0.77
CLDN2P57739 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN2P57739 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.86■□□□□ 0.77
CLDN2P57739 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CLDN2P57739 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN2P57739 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN2P57739 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLDN2P57739 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN2P57739 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN2P57739 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CLDN2P57739 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN2P57739 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN2P57739 AC006128.1-201ENST00000624704 1661 ntBASIC19.85■□□□□ 0.77
CLDN2P57739 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN2P57739 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN2P57739 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN2P57739 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN2P57739 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN2P57739 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CLDN2P57739 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN2P57739 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.85■□□□□ 0.77
CLDN2P57739 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN2P57739 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN2P57739 AL121829.2-201ENST00000620908 328 ntBASIC19.85■□□□□ 0.77
CLDN2P57739 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN2P57739 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN2P57739 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLDN2P57739 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CLDN2P57739 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN2P57739 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN2P57739 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN2P57739 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN2P57739 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN2P57739 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN2P57739 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CLDN2P57739 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.84■□□□□ 0.77
CLDN2P57739 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN2P57739 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN2P57739 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CLDN2P57739 AL049637.2-201ENST00000641778 930 ntBASIC19.84■□□□□ 0.77
CLDN2P57739 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN2P57739 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN2P57739 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN2P57739 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CLDN2P57739 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.83■□□□□ 0.77
CLDN2P57739 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN2P57739 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN2P57739 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN2P57739 HLA-G-202ENST00000376815 851 ntBASIC19.83■□□□□ 0.77
CLDN2P57739 HLA-G-203ENST00000376818 1127 ntBASIC19.83■□□□□ 0.77
CLDN2P57739 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN2P57739 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CLDN2P57739 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.83■□□□□ 0.77
CLDN2P57739 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CLDN2P57739 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN2P57739 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN2P57739 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN2P57739 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN2P57739 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
CLDN2P57739 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.83■□□□□ 0.76
CLDN2P57739 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN2P57739 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN2P57739 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN2P57739 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN2P57739 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN2P57739 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CLDN2P57739 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLDN2P57739 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN2P57739 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN2P57739 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN2P57739 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.82■□□□□ 0.76
CLDN2P57739 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN2P57739 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN2P57739 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN2P57739 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN2P57739 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN2P57739 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN2P57739 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN2P57739 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLDN2P57739 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN2P57739 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN2P57739 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN2P57739 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms