Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN20P56880 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN20P56880 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN20P56880 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLDN20P56880 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN20P56880 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.38■□□□□ 0.53
CLDN20P56880 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN20P56880 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN20P56880 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN20P56880 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN20P56880 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN20P56880 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN20P56880 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CLDN20P56880 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN20P56880 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN20P56880 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN20P56880 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN20P56880 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN20P56880 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN20P56880 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.37■□□□□ 0.53
CLDN20P56880 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN20P56880 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.37■□□□□ 0.53
CLDN20P56880 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN20P56880 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CLDN20P56880 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CLDN20P56880 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN20P56880 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN20P56880 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLDN20P56880 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CLDN20P56880 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN20P56880 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN20P56880 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN20P56880 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN20P56880 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN20P56880 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN20P56880 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN20P56880 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN20P56880 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CLDN20P56880 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.36■□□□□ 0.53
CLDN20P56880 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN20P56880 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN20P56880 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CLDN20P56880 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN20P56880 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.36■□□□□ 0.53
CLDN20P56880 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN20P56880 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN20P56880 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN20P56880 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN20P56880 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CLDN20P56880 AC105020.6-201ENST00000621523 1217 ntBASIC18.36■□□□□ 0.53
CLDN20P56880 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN20P56880 MYC-209ENST00000641252 345 ntBASIC18.36■□□□□ 0.53
CLDN20P56880 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN20P56880 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN20P56880 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN20P56880 AC097658.1-201ENST00000475555 843 ntBASIC18.35■□□□□ 0.53
CLDN20P56880 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN20P56880 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN20P56880 AC083880.1-201ENST00000608266 535 ntBASIC18.35■□□□□ 0.53
CLDN20P56880 AL356652.1-201ENST00000615962 565 ntBASIC18.35■□□□□ 0.53
CLDN20P56880 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CLDN20P56880 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CLDN20P56880 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLDN20P56880 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN20P56880 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN20P56880 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLDN20P56880 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLDN20P56880 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN20P56880 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN20P56880 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN20P56880 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CLDN20P56880 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN20P56880 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN20P56880 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN20P56880 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN20P56880 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN20P56880 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN20P56880 PGM5P4-201ENST00000421970 445 ntBASIC18.34■□□□□ 0.53
CLDN20P56880 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLDN20P56880 KRT18P6-201ENST00000555540 1265 ntBASIC18.34■□□□□ 0.53
CLDN20P56880 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN20P56880 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CLDN20P56880 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN20P56880 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN20P56880 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CLDN20P56880 AC006128.1-201ENST00000624704 1661 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms