Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDX1P52945 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.51■□□□□ 0.71
PDX1P52945 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDX1P52945 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDX1P52945 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDX1P52945 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDX1P52945 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PDX1P52945 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDX1P52945 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PDX1P52945 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDX1P52945 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.5■□□□□ 0.71
PDX1P52945 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PDX1P52945 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDX1P52945 AL049796.1-201ENST00000565336 1766 ntBASIC19.5■□□□□ 0.71
PDX1P52945 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDX1P52945 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDX1P52945 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDX1P52945 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDX1P52945 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDX1P52945 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PDX1P52945 KRASP1-201ENST00000407852 552 ntBASIC19.5■□□□□ 0.71
PDX1P52945 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PDX1P52945 FAM210CP-201ENST00000445714 574 ntBASIC19.5■□□□□ 0.71
PDX1P52945 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDX1P52945 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.5■□□□□ 0.71
PDX1P52945 AC110285.5-201ENST00000611501 352 ntBASIC19.5■□□□□ 0.71
PDX1P52945 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PDX1P52945 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PDX1P52945 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDX1P52945 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.5■□□□□ 0.71
PDX1P52945 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDX1P52945 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PDX1P52945 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDX1P52945 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PDX1P52945 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDX1P52945 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDX1P52945 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.49■□□□□ 0.71
PDX1P52945 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PDX1P52945 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PDX1P52945 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDX1P52945 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PDX1P52945 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PDX1P52945 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.49■□□□□ 0.71
PDX1P52945 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.49■□□□□ 0.71
PDX1P52945 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDX1P52945 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
PDX1P52945 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDX1P52945 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDX1P52945 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.49■□□□□ 0.71
PDX1P52945 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.49■□□□□ 0.71
PDX1P52945 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDX1P52945 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
PDX1P52945 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDX1P52945 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDX1P52945 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDX1P52945 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.48■□□□□ 0.71
PDX1P52945 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.48■□□□□ 0.71
PDX1P52945 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.48■□□□□ 0.71
PDX1P52945 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDX1P52945 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDX1P52945 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.48■□□□□ 0.71
PDX1P52945 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDX1P52945 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDX1P52945 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.48■□□□□ 0.71
PDX1P52945 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.48■□□□□ 0.71
PDX1P52945 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.48■□□□□ 0.71
PDX1P52945 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.48■□□□□ 0.71
PDX1P52945 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDX1P52945 LINC01023-201ENST00000606054 436 ntBASIC19.48■□□□□ 0.71
PDX1P52945 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDX1P52945 AC113410.3-201ENST00000623366 203 ntBASIC19.48■□□□□ 0.71
PDX1P52945 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDX1P52945 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDX1P52945 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDX1P52945 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.48■□□□□ 0.71
PDX1P52945 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDX1P52945 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDX1P52945 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDX1P52945 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDX1P52945 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDX1P52945 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.47■□□□□ 0.71
PDX1P52945 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.47■□□□□ 0.71
PDX1P52945 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.47■□□□□ 0.71
PDX1P52945 TSPY15P-201ENST00000457163 923 ntBASIC19.47■□□□□ 0.71
PDX1P52945 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.47■□□□□ 0.71
PDX1P52945 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.47■□□□□ 0.71
PDX1P52945 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
PDX1P52945 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.47■□□□□ 0.71
PDX1P52945 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDX1P52945 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.47■□□□□ 0.71
PDX1P52945 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDX1P52945 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDX1P52945 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.47■□□□□ 0.71
PDX1P52945 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PDX1P52945 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.47■□□□□ 0.71
PDX1P52945 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDX1P52945 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PDX1P52945 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.46■□□□□ 0.71
PDX1P52945 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.46■□□□□ 0.71
PDX1P52945 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms