Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 RCN1P1-201ENST00000400413 996 ntBASIC22.36■■□□□ 1.17
CPT1AP50416 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPT1AP50416 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPT1AP50416 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.36■■□□□ 1.17
CPT1AP50416 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.36■■□□□ 1.17
CPT1AP50416 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPT1AP50416 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPT1AP50416 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
CPT1AP50416 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CPT1AP50416 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CPT1AP50416 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPT1AP50416 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPT1AP50416 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
CPT1AP50416 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPT1AP50416 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPT1AP50416 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.34■■□□□ 1.17
CPT1AP50416 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.34■■□□□ 1.17
CPT1AP50416 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPT1AP50416 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CPT1AP50416 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPT1AP50416 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPT1AP50416 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPT1AP50416 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.34■■□□□ 1.17
CPT1AP50416 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.34■■□□□ 1.17
CPT1AP50416 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.34■■□□□ 1.17
CPT1AP50416 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.34■■□□□ 1.17
CPT1AP50416 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.34■■□□□ 1.17
CPT1AP50416 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CPT1AP50416 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CPT1AP50416 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPT1AP50416 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CPT1AP50416 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CPT1AP50416 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.34■■□□□ 1.17
CPT1AP50416 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CPT1AP50416 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPT1AP50416 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPT1AP50416 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPT1AP50416 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPT1AP50416 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
CPT1AP50416 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.33■■□□□ 1.17
CPT1AP50416 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CPT1AP50416 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CPT1AP50416 UNC93B2-201ENST00000285383 730 ntBASIC22.33■■□□□ 1.17
CPT1AP50416 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPT1AP50416 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
CPT1AP50416 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
CPT1AP50416 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
CPT1AP50416 RBM17P1-201ENST00000453646 1190 ntBASIC22.33■■□□□ 1.17
CPT1AP50416 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.33■■□□□ 1.17
CPT1AP50416 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.33■■□□□ 1.17
CPT1AP50416 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPT1AP50416 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CPT1AP50416 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CPT1AP50416 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CPT1AP50416 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CPT1AP50416 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CPT1AP50416 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.32■■□□□ 1.16
CPT1AP50416 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
CPT1AP50416 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.32■■□□□ 1.16
CPT1AP50416 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPT1AP50416 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.32■■□□□ 1.16
CPT1AP50416 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CPT1AP50416 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.32■■□□□ 1.16
CPT1AP50416 REXO1L10P-201ENST00000615707 1290 ntBASIC22.32■■□□□ 1.16
CPT1AP50416 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPT1AP50416 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CPT1AP50416 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.32■■□□□ 1.16
CPT1AP50416 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPT1AP50416 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPT1AP50416 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
CPT1AP50416 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.31■■□□□ 1.16
CPT1AP50416 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPT1AP50416 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPT1AP50416 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPT1AP50416 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPT1AP50416 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.31■■□□□ 1.16
CPT1AP50416 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.31■■□□□ 1.16
CPT1AP50416 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CPT1AP50416 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.31■■□□□ 1.16
CPT1AP50416 KRT8P17-201ENST00000453110 1448 ntBASIC22.31■■□□□ 1.16
CPT1AP50416 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPT1AP50416 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CPT1AP50416 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CPT1AP50416 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.3■■□□□ 1.16
CPT1AP50416 KSR1P1-201ENST00000446298 240 ntBASIC22.3■■□□□ 1.16
CPT1AP50416 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.3■■□□□ 1.16
CPT1AP50416 AC145285.6-201ENST00000604632 637 ntBASIC22.3■■□□□ 1.16
CPT1AP50416 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.3■■□□□ 1.16
CPT1AP50416 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPT1AP50416 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPT1AP50416 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.3■■□□□ 1.16
CPT1AP50416 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.3■■□□□ 1.16
CPT1AP50416 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.29■■□□□ 1.16
CPT1AP50416 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPT1AP50416 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPT1AP50416 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPT1AP50416 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CPT1AP50416 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.29■■□□□ 1.16
CPT1AP50416 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPT1AP50416 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms