Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDNFP39905 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GDNFP39905 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.42■□□□□ 0.38
GDNFP39905 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GDNFP39905 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GDNFP39905 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.42■□□□□ 0.38
GDNFP39905 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.42■□□□□ 0.38
GDNFP39905 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.42■□□□□ 0.38
GDNFP39905 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GDNFP39905 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GDNFP39905 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GDNFP39905 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
GDNFP39905 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GDNFP39905 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.42■□□□□ 0.38
GDNFP39905 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.42■□□□□ 0.38
GDNFP39905 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.42■□□□□ 0.38
GDNFP39905 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GDNFP39905 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GDNFP39905 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GDNFP39905 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.42■□□□□ 0.38
GDNFP39905 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GDNFP39905 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
GDNFP39905 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GDNFP39905 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDNFP39905 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.41■□□□□ 0.38
GDNFP39905 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDNFP39905 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.41■□□□□ 0.38
GDNFP39905 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.41■□□□□ 0.38
GDNFP39905 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.41■□□□□ 0.38
GDNFP39905 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.41■□□□□ 0.38
GDNFP39905 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.41■□□□□ 0.38
GDNFP39905 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.41■□□□□ 0.38
GDNFP39905 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GDNFP39905 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.41■□□□□ 0.38
GDNFP39905 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.41■□□□□ 0.38
GDNFP39905 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDNFP39905 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDNFP39905 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GDNFP39905 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.41■□□□□ 0.38
GDNFP39905 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GDNFP39905 NEFHP1-201ENST00000412845 2629 ntBASIC17.41■□□□□ 0.38
GDNFP39905 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.41■□□□□ 0.38
GDNFP39905 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GDNFP39905 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.41■□□□□ 0.38
GDNFP39905 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDNFP39905 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.4■□□□□ 0.38
GDNFP39905 AC093484.2-201ENST00000580996 2166 ntBASIC17.4■□□□□ 0.38
GDNFP39905 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDNFP39905 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDNFP39905 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.4■□□□□ 0.38
GDNFP39905 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.4■□□□□ 0.38
GDNFP39905 AC120498.9-201ENST00000339021 3867 ntBASIC17.4■□□□□ 0.38
GDNFP39905 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDNFP39905 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GDNFP39905 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDNFP39905 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
GDNFP39905 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDNFP39905 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GDNFP39905 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GDNFP39905 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
GDNFP39905 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDNFP39905 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDNFP39905 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GDNFP39905 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.4■□□□□ 0.38
GDNFP39905 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDNFP39905 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.4■□□□□ 0.38
GDNFP39905 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GDNFP39905 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.39■□□□□ 0.38
GDNFP39905 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.39■□□□□ 0.38
GDNFP39905 AC093503.3-201ENST00000624917 2352 ntBASIC17.39■□□□□ 0.38
GDNFP39905 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
GDNFP39905 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.39■□□□□ 0.37
GDNFP39905 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
GDNFP39905 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.39■□□□□ 0.37
GDNFP39905 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.39■□□□□ 0.37
GDNFP39905 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.39■□□□□ 0.37
GDNFP39905 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.39■□□□□ 0.37
GDNFP39905 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
GDNFP39905 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GDNFP39905 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms