Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.76□□□□□ -0.05
CKS2P33552 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.76□□□□□ -0.05
CKS2P33552 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.76□□□□□ -0.05
CKS2P33552 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.76□□□□□ -0.05
CKS2P33552 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 AC026471.1-201ENST00000564629 3026 ntBASIC14.76□□□□□ -0.05
CKS2P33552 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CKS2P33552 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS2P33552 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.76□□□□□ -0.05
CKS2P33552 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
CKS2P33552 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.75□□□□□ -0.05
CKS2P33552 AC055733.4-201ENST00000638462 1354 ntBASIC14.75□□□□□ -0.05
CKS2P33552 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.75□□□□□ -0.05
CKS2P33552 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CKS2P33552 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.75□□□□□ -0.05
CKS2P33552 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.75□□□□□ -0.05
CKS2P33552 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.75□□□□□ -0.05
CKS2P33552 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.75□□□□□ -0.05
CKS2P33552 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 TMEM179-206ENST00000616017 1645 ntBASIC14.75□□□□□ -0.05
CKS2P33552 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.75□□□□□ -0.05
CKS2P33552 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.75□□□□□ -0.05
CKS2P33552 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.75□□□□□ -0.05
CKS2P33552 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CKS2P33552 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CKS2P33552 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 AC093484.2-201ENST00000580996 2166 ntBASIC14.75□□□□□ -0.05
CKS2P33552 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.75□□□□□ -0.05
CKS2P33552 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.75□□□□□ -0.05
CKS2P33552 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.75□□□□□ -0.05
CKS2P33552 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKS2P33552 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CKS2P33552 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.74□□□□□ -0.05
CKS2P33552 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
CKS2P33552 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CKS2P33552 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.74□□□□□ -0.05
CKS2P33552 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CKS2P33552 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.74□□□□□ -0.05
CKS2P33552 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.74□□□□□ -0.05
CKS2P33552 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CKS2P33552 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.74□□□□□ -0.05
CKS2P33552 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.74□□□□□ -0.05
CKS2P33552 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.74□□□□□ -0.05
CKS2P33552 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.74□□□□□ -0.05
CKS2P33552 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
CKS2P33552 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.74□□□□□ -0.05
CKS2P33552 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.74□□□□□ -0.05
CKS2P33552 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS2P33552 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.74□□□□□ -0.05
CKS2P33552 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.74□□□□□ -0.05
CKS2P33552 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.73□□□□□ -0.05
CKS2P33552 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS2P33552 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CKS2P33552 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKS2P33552 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms