Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 SPA2YLL021W 4401 nt3.71□□□□□ -1.81
RIM101P33400 YGL063C-AYGL063C-A 150 nt3.7□□□□□ -1.82
RIM101P33400 NUP100YKL068W 2880 nt3.7□□□□□ -1.82
RIM101P33400 RPN1YHR027C 2982 nt3.69□□□□□ -1.82
RIM101P33400 RPS21AYKR057W 264 nt3.69□□□□□ -1.82
RIM101P33400 LCL1YPL056C 306 nt3.69□□□□□ -1.82
RIM101P33400 SEC21YNL287W 2808 nt3.69□□□□□ -1.82
RIM101P33400 POL2YNL262W 6669 nt3.68□□□□□ -1.82
RIM101P33400 MDM1YML104C 3384 nt3.68□□□□□ -1.82
RIM101P33400 POL5YEL055C 3069 nt3.68□□□□□ -1.82
RIM101P33400 CAF120YNL278W 3183 nt3.67□□□□□ -1.82
RIM101P33400 YLR278CYLR278C 4026 nt3.67□□□□□ -1.82
RIM101P33400 URA2YJL130C 6645 nt3.66□□□□□ -1.82
RIM101P33400 AMS1YGL156W 3252 nt3.65□□□□□ -1.82
RIM101P33400 YER172C-AYER172C-A 381 nt3.65□□□□□ -1.83
RIM101P33400 GCN2YDR283C 4980 nt3.65□□□□□ -1.83
RIM101P33400 CTR9YOL145C 3234 nt3.64□□□□□ -1.83
RIM101P33400 NOP9YJL010C 2001 nt3.63□□□□□ -1.83
RIM101P33400 STT4YLR305C 5703 nt3.62□□□□□ -1.83
RIM101P33400 RAX2YLR084C 3663 nt3.62□□□□□ -1.83
RIM101P33400 YGR027W-BYGR027W-B 5268 nt3.62□□□□□ -1.83
RIM101P33400 YLR227W-BYLR227W-B 5268 nt3.62□□□□□ -1.83
RIM101P33400 YPR158C-DYPR158C-D 5268 nt3.62□□□□□ -1.83
RIM101P33400 YLR149C-AYLR149C-A 87 nt3.6□□□□□ -1.83
RIM101P33400 MMS4YBR098W 2076 nt3.59□□□□□ -1.83
RIM101P33400 MET18YIL128W 3099 nt3.59□□□□□ -1.83
RIM101P33400 TIM9YEL020W-A 264 nt3.59□□□□□ -1.83
RIM101P33400 TRM3YDL112W 4311 nt3.59□□□□□ -1.84
RIM101P33400 SEY1YOR165W 2331 nt3.59□□□□□ -1.84
RIM101P33400 RSE1YML049C 4086 nt3.59□□□□□ -1.84
RIM101P33400 COA6YMR244C-A 315 nt3.58□□□□□ -1.84
RIM101P33400 IRE1YHR079C 3348 nt3.57□□□□□ -1.84
RIM101P33400 CSR2YPR030W 3366 nt3.57□□□□□ -1.84
RIM101P33400 NMD2YHR077C 3270 nt3.57□□□□□ -1.84
RIM101P33400 RPM2YML091C 3609 nt3.56□□□□□ -1.84
RIM101P33400 SPO71YDR104C 3738 nt3.56□□□□□ -1.84
RIM101P33400 YEF3YLR249W 3135 nt3.56□□□□□ -1.84
RIM101P33400 RRP5YMR229C 5190 nt3.56□□□□□ -1.84
RIM101P33400 TUS1YLR425W 3924 nt3.56□□□□□ -1.84
RIM101P33400 SEC10YLR166C 2616 nt3.55□□□□□ -1.84
RIM101P33400 YKL225WYKL225W 348 nt3.55□□□□□ -1.84
RIM101P33400 YLR041WYLR041W 321 nt3.55□□□□□ -1.84
RIM101P33400 UFD4YKL010C 4452 nt3.55□□□□□ -1.84
RIM101P33400 NUP157YER105C 4176 nt3.55□□□□□ -1.84
RIM101P33400 FLO1YAR050W 4614 nt3.55□□□□□ -1.84
RIM101P33400 RIF1YBR275C 5751 nt3.53□□□□□ -1.84
RIM101P33400 SMC1YFL008W 3678 nt3.53□□□□□ -1.84
RIM101P33400 MYO2YOR326W 4725 nt3.51□□□□□ -1.85
RIM101P33400 RPS29AYLR388W 171 nt3.51□□□□□ -1.85
RIM101P33400 YPR097WYPR097W 3222 nt3.51□□□□□ -1.85
RIM101P33400 AKR1YDR264C 2295 nt3.5□□□□□ -1.85
RIM101P33400 ALY2YJL084C 3141 nt3.5□□□□□ -1.85
RIM101P33400 RPS28BYLR264W 204 nt3.49□□□□□ -1.85
RIM101P33400 YBR200W-AYBR200W-A 165 nt3.49□□□□□ -1.85
RIM101P33400 RAD9YDR217C 3930 nt3.49□□□□□ -1.85
RIM101P33400 PET309YLR067C 2898 nt3.49□□□□□ -1.85
RIM101P33400 SNQ2YDR011W 4506 nt3.48□□□□□ -1.85
RIM101P33400 PDR3YBL005W 2931 nt3.48□□□□□ -1.85
RIM101P33400 TRS130YMR218C 3309 nt3.46□□□□□ -1.86
RIM101P33400 GCN1YGL195W 8019 nt3.46□□□□□ -1.86
RIM101P33400 TOF1YNL273W 3717 nt3.45□□□□□ -1.86
RIM101P33400 TRL1YJL087C 2484 nt3.43□□□□□ -1.86
RIM101P33400 TAO3YIL129C 7131 nt3.42□□□□□ -1.86
RIM101P33400 UBP3YER151C 2739 nt3.42□□□□□ -1.86
RIM101P33400 GYP5YPL249C 2685 nt3.41□□□□□ -1.86
RIM101P33400 SYH1YPL105C 2550 nt3.41□□□□□ -1.86
RIM101P33400 TCB2YNL087W 3537 nt3.41□□□□□ -1.86
RIM101P33400 SPO24YPR036W-A 204 nt3.41□□□□□ -1.86
RIM101P33400 RGA1YOR127W 3024 nt3.41□□□□□ -1.86
RIM101P33400 PAN2YGL094C 3348 nt3.41□□□□□ -1.86
RIM101P33400 STE6YKL209C 3873 nt3.41□□□□□ -1.86
RIM101P33400 tC(GCA)BtC(GCA)B 72 nt3.4□□□□□ -1.87
RIM101P33400 tC(GCA)GtC(GCA)G 72 nt3.4□□□□□ -1.87
RIM101P33400 tC(GCA)P1tC(GCA)P1 72 nt3.4□□□□□ -1.87
RIM101P33400 tC(GCA)P2tC(GCA)P2 72 nt3.4□□□□□ -1.87
RIM101P33400 MDN1YLR106C 14733 nt3.39□□□□□ -1.87
RIM101P33400 RPL26BYGR034W 384 nt3.39□□□□□ -1.87
RIM101P33400 WAR1YML076C 2835 nt3.39□□□□□ -1.87
RIM101P33400 UBR1YGR184C 5853 nt3.39□□□□□ -1.87
RIM101P33400 YOR343W-BYOR343W-B 5313 nt3.38□□□□□ -1.87
RIM101P33400 SLA1YBL007C 3735 nt3.37□□□□□ -1.87
RIM101P33400 AZF1YOR113W 2745 nt3.37□□□□□ -1.87
RIM101P33400 ILS1YBL076C 3219 nt3.37□□□□□ -1.87
RIM101P33400 SFB2YNL049C 2631 nt3.36□□□□□ -1.87
RIM101P33400 CIN8YEL061C 3003 nt3.36□□□□□ -1.87
RIM101P33400 SLH1YGR271W 5904 nt3.35□□□□□ -1.87
RIM101P33400 PAU10YDR542W 363 nt3.35□□□□□ -1.87
RIM101P33400 PAU4YLR461W 363 nt3.35□□□□□ -1.87
RIM101P33400 CHC1YGL206C 4962 nt3.34□□□□□ -1.87
RIM101P33400 ESL1YIL151C 3357 nt3.34□□□□□ -1.87
RIM101P33400 SLN1YIL147C 3663 nt3.34□□□□□ -1.88
RIM101P33400 snR190snR190 190 nt3.33□□□□□ -1.88
RIM101P33400 CHS1YNL192W 3396 nt3.32□□□□□ -1.88
RIM101P33400 SSD1YDR293C 3753 nt3.31□□□□□ -1.88
RIM101P33400 PIK1YNL267W 3201 nt3.31□□□□□ -1.88
RIM101P33400 YLR299C-AYLR299C-A 93 nt3.31□□□□□ -1.88
RIM101P33400 FLO11YIR019C 4104 nt3.31□□□□□ -1.88
RIM101P33400 YAR009CYAR009C 3591 nt3.3□□□□□ -1.88
RIM101P33400 PRP8YHR165C 7242 nt3.29□□□□□ -1.88
RIM101P33400 NUT1YGL151W 3399 nt3.29□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 51.2 ms