Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.42■□□□□ 0.22
NF1P21359 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NF1P21359 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
NF1P21359 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.42■□□□□ 0.22
NF1P21359 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.42■□□□□ 0.22
NF1P21359 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.42■□□□□ 0.22
NF1P21359 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.42■□□□□ 0.22
NF1P21359 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NF1P21359 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NF1P21359 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NF1P21359 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NF1P21359 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NF1P21359 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.42■□□□□ 0.22
NF1P21359 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NF1P21359 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NF1P21359 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.42■□□□□ 0.22
NF1P21359 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.42■□□□□ 0.22
NF1P21359 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NF1P21359 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NF1P21359 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.41■□□□□ 0.22
NF1P21359 AC117500.6-201ENST00000624871 588 ntBASIC16.41■□□□□ 0.22
NF1P21359 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NF1P21359 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NF1P21359 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.41■□□□□ 0.22
NF1P21359 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NF1P21359 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.41■□□□□ 0.22
NF1P21359 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NF1P21359 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NF1P21359 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.41■□□□□ 0.22
NF1P21359 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NF1P21359 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NF1P21359 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NF1P21359 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.41■□□□□ 0.22
NF1P21359 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NF1P21359 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.41■□□□□ 0.22
NF1P21359 PMS2P1-201ENST00000431037 1228 ntBASIC16.41■□□□□ 0.22
NF1P21359 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.41■□□□□ 0.22
NF1P21359 UNC93B7-201ENST00000509439 705 ntBASIC16.41■□□□□ 0.22
NF1P21359 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.41■□□□□ 0.22
NF1P21359 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.41■□□□□ 0.22
NF1P21359 AC104692.2-201ENST00000603054 253 ntBASIC16.41■□□□□ 0.22
NF1P21359 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NF1P21359 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NF1P21359 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.41■□□□□ 0.22
NF1P21359 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NF1P21359 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NF1P21359 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.4■□□□□ 0.22
NF1P21359 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.4■□□□□ 0.22
NF1P21359 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NF1P21359 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.4■□□□□ 0.22
NF1P21359 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.4■□□□□ 0.22
NF1P21359 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NF1P21359 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.4■□□□□ 0.22
NF1P21359 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NF1P21359 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NF1P21359 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NF1P21359 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.4■□□□□ 0.22
NF1P21359 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.4■□□□□ 0.22
NF1P21359 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.4■□□□□ 0.22
NF1P21359 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.4■□□□□ 0.22
NF1P21359 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NF1P21359 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NF1P21359 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NF1P21359 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NF1P21359 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NF1P21359 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NF1P21359 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NF1P21359 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.39■□□□□ 0.21
NF1P21359 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NF1P21359 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NF1P21359 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
NF1P21359 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NF1P21359 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NF1P21359 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.39■□□□□ 0.21
NF1P21359 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NF1P21359 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.39■□□□□ 0.21
NF1P21359 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.39■□□□□ 0.21
NF1P21359 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NF1P21359 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NF1P21359 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NF1P21359 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NF1P21359 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NF1P21359 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NF1P21359 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NF1P21359 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.38■□□□□ 0.21
NF1P21359 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
NF1P21359 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.38■□□□□ 0.21
NF1P21359 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.38■□□□□ 0.21
NF1P21359 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NF1P21359 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.38■□□□□ 0.21
NF1P21359 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.38■□□□□ 0.21
NF1P21359 AC068473.5-201ENST00000616428 2072 ntBASIC16.38■□□□□ 0.21
NF1P21359 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NF1P21359 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NF1P21359 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.38■□□□□ 0.21
NF1P21359 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NF1P21359 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.38■□□□□ 0.21
NF1P21359 NIFKP9-201ENST00000419265 221 ntBASIC16.38■□□□□ 0.21
NF1P21359 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
NF1P21359 COX11P1-201ENST00000489116 835 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms