Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT3P12035 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.16■□□□□ 0.98
KRT3P12035 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT3P12035 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT3P12035 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT3P12035 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT3P12035 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT3P12035 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
KRT3P12035 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT3P12035 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.16■□□□□ 0.98
KRT3P12035 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT3P12035 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.16■□□□□ 0.98
KRT3P12035 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.16■□□□□ 0.98
KRT3P12035 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT3P12035 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
KRT3P12035 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT3P12035 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT3P12035 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
KRT3P12035 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
KRT3P12035 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT3P12035 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT3P12035 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT3P12035 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.15■□□□□ 0.98
KRT3P12035 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.15■□□□□ 0.98
KRT3P12035 LSM12P1-201ENST00000411836 588 ntBASIC21.15■□□□□ 0.98
KRT3P12035 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT3P12035 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT3P12035 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.15■□□□□ 0.98
KRT3P12035 AC083906.2-201ENST00000511578 360 ntBASIC21.15■□□□□ 0.98
KRT3P12035 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT3P12035 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT3P12035 AL121832.2-201ENST00000610979 668 ntBASIC21.15■□□□□ 0.98
KRT3P12035 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT3P12035 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
KRT3P12035 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
KRT3P12035 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT3P12035 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.14■□□□□ 0.97
KRT3P12035 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT3P12035 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
KRT3P12035 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT3P12035 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT3P12035 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
KRT3P12035 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT3P12035 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.14■□□□□ 0.97
KRT3P12035 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
KRT3P12035 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRT3P12035 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT3P12035 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.14■□□□□ 0.97
KRT3P12035 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.14■□□□□ 0.97
KRT3P12035 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
KRT3P12035 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT3P12035 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT3P12035 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT3P12035 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.13■□□□□ 0.97
KRT3P12035 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT3P12035 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT3P12035 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.13■□□□□ 0.97
KRT3P12035 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT3P12035 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT3P12035 BX276092.2-201ENST00000417668 665 ntBASIC21.13■□□□□ 0.97
KRT3P12035 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT3P12035 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.13■□□□□ 0.97
KRT3P12035 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.13■□□□□ 0.97
KRT3P12035 C2orf69P4-201ENST00000565394 541 ntBASIC21.13■□□□□ 0.97
KRT3P12035 PTBP1P-201ENST00000554374 1601 ntBASIC21.13■□□□□ 0.97
KRT3P12035 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
KRT3P12035 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT3P12035 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.12■□□□□ 0.97
KRT3P12035 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.12■□□□□ 0.97
KRT3P12035 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT3P12035 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRT3P12035 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT3P12035 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
KRT3P12035 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.12■□□□□ 0.97
KRT3P12035 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
KRT3P12035 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.12■□□□□ 0.97
KRT3P12035 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.12■□□□□ 0.97
KRT3P12035 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.12■□□□□ 0.97
KRT3P12035 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.12■□□□□ 0.97
KRT3P12035 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRT3P12035 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
KRT3P12035 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT3P12035 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT3P12035 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT3P12035 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms