Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
PF4V1P10720 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PF4V1P10720 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.9■□□□□ 0.14
PF4V1P10720 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PF4V1P10720 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PF4V1P10720 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PF4V1P10720 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PF4V1P10720 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PF4V1P10720 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PF4V1P10720 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PF4V1P10720 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PF4V1P10720 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PF4V1P10720 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PF4V1P10720 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PF4V1P10720 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PF4V1P10720 GCSHP5-201ENST00000443090 522 ntBASIC15.89■□□□□ 0.13
PF4V1P10720 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PF4V1P10720 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.89■□□□□ 0.13
PF4V1P10720 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.89■□□□□ 0.13
PF4V1P10720 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.89■□□□□ 0.13
PF4V1P10720 HLA-B-256ENST00000639848 1089 ntBASIC15.89■□□□□ 0.13
PF4V1P10720 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PF4V1P10720 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.89■□□□□ 0.13
PF4V1P10720 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.89■□□□□ 0.13
PF4V1P10720 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PF4V1P10720 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PF4V1P10720 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PF4V1P10720 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PF4V1P10720 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PF4V1P10720 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PF4V1P10720 AC092368.3-202ENST00000574180 1591 ntBASIC15.88■□□□□ 0.13
PF4V1P10720 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.88■□□□□ 0.13
PF4V1P10720 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PF4V1P10720 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PF4V1P10720 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.88■□□□□ 0.13
PF4V1P10720 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PF4V1P10720 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.88■□□□□ 0.13
PF4V1P10720 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.88■□□□□ 0.13
PF4V1P10720 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PF4V1P10720 UNC93B4-201ENST00000505679 747 ntBASIC15.88■□□□□ 0.13
PF4V1P10720 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.88■□□□□ 0.13
PF4V1P10720 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.88■□□□□ 0.13
PF4V1P10720 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PF4V1P10720 AC073648.6-201ENST00000641589 218 ntBASIC15.88■□□□□ 0.13
PF4V1P10720 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PF4V1P10720 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
PF4V1P10720 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PF4V1P10720 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PF4V1P10720 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PF4V1P10720 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PF4V1P10720 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PF4V1P10720 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.88■□□□□ 0.13
PF4V1P10720 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PF4V1P10720 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.88■□□□□ 0.13
PF4V1P10720 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PF4V1P10720 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.88■□□□□ 0.13
PF4V1P10720 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PF4V1P10720 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.88■□□□□ 0.13
PF4V1P10720 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PF4V1P10720 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PF4V1P10720 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.87■□□□□ 0.13
PF4V1P10720 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PF4V1P10720 AC007225.1-201ENST00000566331 1836 ntBASIC15.87■□□□□ 0.13
PF4V1P10720 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.87■□□□□ 0.13
PF4V1P10720 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PF4V1P10720 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
PF4V1P10720 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PF4V1P10720 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.87■□□□□ 0.13
PF4V1P10720 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.87■□□□□ 0.13
PF4V1P10720 FAM197Y4-202ENST00000622692 608 ntBASIC15.87■□□□□ 0.13
PF4V1P10720 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PF4V1P10720 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
PF4V1P10720 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.87■□□□□ 0.13
PF4V1P10720 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PF4V1P10720 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PF4V1P10720 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PF4V1P10720 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PF4V1P10720 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.87■□□□□ 0.13
PF4V1P10720 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PF4V1P10720 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.87■□□□□ 0.13
PF4V1P10720 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PF4V1P10720 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PF4V1P10720 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
PF4V1P10720 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PF4V1P10720 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PF4V1P10720 KRT8P36-201ENST00000489121 1440 ntBASIC15.86■□□□□ 0.13
PF4V1P10720 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PF4V1P10720 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PF4V1P10720 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.86■□□□□ 0.13
PF4V1P10720 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PF4V1P10720 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PF4V1P10720 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.86■□□□□ 0.13
PF4V1P10720 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.86■□□□□ 0.13
PF4V1P10720 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.86■□□□□ 0.13
PF4V1P10720 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PF4V1P10720 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PF4V1P10720 KRT17P3-201ENST00000420566 1262 ntBASIC15.86■□□□□ 0.13
PF4V1P10720 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PF4V1P10720 PNMA6B-201ENST00000538162 1200 ntBASIC15.86■□□□□ 0.13
PF4V1P10720 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms