Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.26■□□□□ 0.51
FREM3P0C091 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.26■□□□□ 0.51
FREM3P0C091 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FREM3P0C091 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FREM3P0C091 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FREM3P0C091 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
FREM3P0C091 PCDHAC2-203ENST00000615316 3011 ntBASIC18.26■□□□□ 0.51
FREM3P0C091 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FREM3P0C091 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FREM3P0C091 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FREM3P0C091 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
FREM3P0C091 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FREM3P0C091 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FREM3P0C091 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
FREM3P0C091 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.26■□□□□ 0.51
FREM3P0C091 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.26■□□□□ 0.51
FREM3P0C091 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FREM3P0C091 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.26■□□□□ 0.51
FREM3P0C091 SOX15-203ENST00000570788 1093 ntBASIC18.26■□□□□ 0.51
FREM3P0C091 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FREM3P0C091 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.26■□□□□ 0.51
FREM3P0C091 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.25■□□□□ 0.51
FREM3P0C091 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM3P0C091 SLC25A24-204ENST00000569674 2357 ntBASIC18.25■□□□□ 0.51
FREM3P0C091 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM3P0C091 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM3P0C091 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FREM3P0C091 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM3P0C091 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FREM3P0C091 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
FREM3P0C091 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM3P0C091 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM3P0C091 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM3P0C091 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.25■□□□□ 0.51
FREM3P0C091 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.25■□□□□ 0.51
FREM3P0C091 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FREM3P0C091 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.25■□□□□ 0.51
FREM3P0C091 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
FREM3P0C091 C1QBPP2-201ENST00000528754 825 ntBASIC18.25■□□□□ 0.51
FREM3P0C091 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.25■□□□□ 0.51
FREM3P0C091 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.24■□□□□ 0.51
FREM3P0C091 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.24■□□□□ 0.51
FREM3P0C091 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FREM3P0C091 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.24■□□□□ 0.51
FREM3P0C091 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FREM3P0C091 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
FREM3P0C091 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
FREM3P0C091 AC124283.5-201ENST00000624661 1809 ntBASIC18.24■□□□□ 0.51
FREM3P0C091 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FREM3P0C091 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.24■□□□□ 0.51
FREM3P0C091 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FREM3P0C091 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
FREM3P0C091 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
FREM3P0C091 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FREM3P0C091 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
FREM3P0C091 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.24■□□□□ 0.51
FREM3P0C091 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FREM3P0C091 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
FREM3P0C091 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FREM3P0C091 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.23■□□□□ 0.51
FREM3P0C091 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.23■□□□□ 0.51
FREM3P0C091 FAM197Y4-202ENST00000622692 608 ntBASIC18.23■□□□□ 0.51
FREM3P0C091 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.23■□□□□ 0.51
FREM3P0C091 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.23■□□□□ 0.51
FREM3P0C091 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.23■□□□□ 0.51
FREM3P0C091 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.23■□□□□ 0.51
FREM3P0C091 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.23■□□□□ 0.51
FREM3P0C091 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.23■□□□□ 0.51
FREM3P0C091 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 AC128676.1-201ENST00000454392 318 ntBASIC18.23■□□□□ 0.51
FREM3P0C091 C2orf69P4-201ENST00000565394 541 ntBASIC18.23■□□□□ 0.51
FREM3P0C091 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
FREM3P0C091 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.23■□□□□ 0.51
FREM3P0C091 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FREM3P0C091 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
FREM3P0C091 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
FREM3P0C091 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.22■□□□□ 0.51
FREM3P0C091 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.22■□□□□ 0.51
FREM3P0C091 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FREM3P0C091 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.22■□□□□ 0.51
FREM3P0C091 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FREM3P0C091 KRT18P29-201ENST00000397031 1267 ntBASIC18.22■□□□□ 0.51
FREM3P0C091 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.22■□□□□ 0.51
FREM3P0C091 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
FREM3P0C091 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.22■□□□□ 0.51
FREM3P0C091 MTDHP1-201ENST00000605323 784 ntBASIC18.22■□□□□ 0.51
FREM3P0C091 HLA-B-256ENST00000639848 1089 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms