Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHGBP05060 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHGBP05060 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC24.2■■□□□ 1.47
CHGBP05060 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CHGBP05060 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
CHGBP05060 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CHGBP05060 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHGBP05060 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHGBP05060 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHGBP05060 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.2■■□□□ 1.46
CHGBP05060 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHGBP05060 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHGBP05060 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC24.2■■□□□ 1.46
CHGBP05060 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
CHGBP05060 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
CHGBP05060 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHGBP05060 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHGBP05060 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
CHGBP05060 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHGBP05060 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
CHGBP05060 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHGBP05060 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC24.2■■□□□ 1.46
CHGBP05060 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.2■■□□□ 1.46
CHGBP05060 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHGBP05060 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHGBP05060 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHGBP05060 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.19■■□□□ 1.46
CHGBP05060 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC24.19■■□□□ 1.46
CHGBP05060 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHGBP05060 PRORSD1P-201ENST00000295112 541 ntBASIC24.19■■□□□ 1.46
CHGBP05060 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.19■■□□□ 1.46
CHGBP05060 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.19■■□□□ 1.46
CHGBP05060 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC24.19■■□□□ 1.46
CHGBP05060 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CHGBP05060 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC24.19■■□□□ 1.46
CHGBP05060 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHGBP05060 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.19■■□□□ 1.46
CHGBP05060 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHGBP05060 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.18■■□□□ 1.46
CHGBP05060 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
CHGBP05060 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC24.18■■□□□ 1.46
CHGBP05060 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.18■■□□□ 1.46
CHGBP05060 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 GGT1-206ENST00000404223 952 ntTSL 2 BASIC24.18■■□□□ 1.46
CHGBP05060 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
CHGBP05060 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC24.18■■□□□ 1.46
CHGBP05060 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC24.18■■□□□ 1.46
CHGBP05060 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.18■■□□□ 1.46
CHGBP05060 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.18■■□□□ 1.46
CHGBP05060 AC006058.3-201ENST00000606217 1069 ntBASIC24.18■■□□□ 1.46
CHGBP05060 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
CHGBP05060 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC24.18■■□□□ 1.46
CHGBP05060 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHGBP05060 AC099778.1-201ENST00000568593 1911 ntBASIC24.18■■□□□ 1.46
CHGBP05060 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CHGBP05060 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHGBP05060 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHGBP05060 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
CHGBP05060 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
CHGBP05060 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
CHGBP05060 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHGBP05060 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
CHGBP05060 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
CHGBP05060 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHGBP05060 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
CHGBP05060 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHGBP05060 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHGBP05060 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHGBP05060 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHGBP05060 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHGBP05060 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CHGBP05060 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.16■■□□□ 1.46
CHGBP05060 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CHGBP05060 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC24.16■■□□□ 1.46
CHGBP05060 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC24.16■■□□□ 1.46
CHGBP05060 AC128676.1-201ENST00000454392 318 ntBASIC24.16■■□□□ 1.46
CHGBP05060 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.16■■□□□ 1.46
CHGBP05060 AC073648.6-201ENST00000641589 218 ntBASIC24.16■■□□□ 1.46
CHGBP05060 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
CHGBP05060 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.16■■□□□ 1.46
CHGBP05060 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHGBP05060 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CHGBP05060 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC24.15■■□□□ 1.46
CHGBP05060 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHGBP05060 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms