Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HLA-DPB1P04440 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18■□□□□ 0.47
HLA-DPB1P04440 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18■□□□□ 0.47
HLA-DPB1P04440 AC034268.1-201ENST00000441047 882 ntBASIC18■□□□□ 0.47
HLA-DPB1P04440 EEF1DP3-203ENST00000566025 782 ntBASIC18■□□□□ 0.47
HLA-DPB1P04440 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DPB1P04440 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18■□□□□ 0.47
HLA-DPB1P04440 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DPB1P04440 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DPB1P04440 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
HLA-DPB1P04440 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DPB1P04440 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HLA-DPB1P04440 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 AC053503.5-201ENST00000601508 636 ntBASIC17.99■□□□□ 0.47
HLA-DPB1P04440 AC104187.1-201ENST00000607510 612 ntBASIC17.99■□□□□ 0.47
HLA-DPB1P04440 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 AP004607.4-201ENST00000530158 1459 ntBASIC17.99■□□□□ 0.47
HLA-DPB1P04440 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DPB1P04440 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DPB1P04440 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 AC005332.7-201ENST00000614046 2005 ntBASIC17.97■□□□□ 0.47
HLA-DPB1P04440 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DPB1P04440 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DPB1P04440 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms