Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND1P03886 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
MT-ND1P03886 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND1P03886 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.9■□□□□ 0.62
MT-ND1P03886 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
MT-ND1P03886 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND1P03886 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND1P03886 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND1P03886 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
MT-ND1P03886 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND1P03886 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND1P03886 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
MT-ND1P03886 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND1P03886 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.9■□□□□ 0.62
MT-ND1P03886 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND1P03886 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.9■□□□□ 0.62
MT-ND1P03886 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND1P03886 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND1P03886 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
MT-ND1P03886 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-ND1P03886 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
MT-ND1P03886 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
MT-ND1P03886 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.89■□□□□ 0.62
MT-ND1P03886 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MT-ND1P03886 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.89■□□□□ 0.62
MT-ND1P03886 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MT-ND1P03886 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
MT-ND1P03886 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MT-ND1P03886 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.89■□□□□ 0.62
MT-ND1P03886 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
MT-ND1P03886 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
MT-ND1P03886 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND1P03886 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MT-ND1P03886 IRS3P-201ENST00000223076 1006 ntBASIC18.89■□□□□ 0.61
MT-ND1P03886 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.89■□□□□ 0.61
MT-ND1P03886 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.89■□□□□ 0.61
MT-ND1P03886 MIR6084-201ENST00000622012 110 ntBASIC18.89■□□□□ 0.61
MT-ND1P03886 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MT-ND1P03886 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.89■□□□□ 0.61
MT-ND1P03886 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND1P03886 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND1P03886 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
MT-ND1P03886 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND1P03886 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
MT-ND1P03886 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MT-ND1P03886 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
MT-ND1P03886 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND1P03886 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.88■□□□□ 0.61
MT-ND1P03886 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND1P03886 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.88■□□□□ 0.61
MT-ND1P03886 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.88■□□□□ 0.61
MT-ND1P03886 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND1P03886 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.88■□□□□ 0.61
MT-ND1P03886 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND1P03886 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.88■□□□□ 0.61
MT-ND1P03886 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND1P03886 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MT-ND1P03886 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND1P03886 DPP3P2-201ENST00000416030 1696 ntBASIC18.88■□□□□ 0.61
MT-ND1P03886 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.88■□□□□ 0.61
MT-ND1P03886 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND1P03886 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.88■□□□□ 0.61
MT-ND1P03886 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND1P03886 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND1P03886 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-ND1P03886 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND1P03886 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND1P03886 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND1P03886 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND1P03886 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND1P03886 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
MT-ND1P03886 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND1P03886 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.87■□□□□ 0.61
MT-ND1P03886 AC105265.2-201ENST00000467189 838 ntBASIC18.87■□□□□ 0.61
MT-ND1P03886 AC079140.4-201ENST00000507448 529 ntBASIC18.87■□□□□ 0.61
MT-ND1P03886 KRT87P-202ENST00000534226 1464 ntBASIC18.87■□□□□ 0.61
MT-ND1P03886 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.87■□□□□ 0.61
MT-ND1P03886 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND1P03886 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-ND1P03886 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
MT-ND1P03886 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.86■□□□□ 0.61
MT-ND1P03886 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.86■□□□□ 0.61
MT-ND1P03886 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.86■□□□□ 0.61
MT-ND1P03886 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
MT-ND1P03886 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 AC020763.4-201ENST00000623414 4170 ntBASIC18.86■□□□□ 0.61
MT-ND1P03886 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
MT-ND1P03886 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-ND1P03886 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.86■□□□□ 0.61
MT-ND1P03886 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MT-ND1P03886 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.86■□□□□ 0.61
MT-ND1P03886 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 409.2 ms