Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-AP01891 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-AP01891 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
HLA-AP01891 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
HLA-AP01891 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HLA-AP01891 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-AP01891 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-AP01891 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.91■□□□□ 0.3
HLA-AP01891 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.91■□□□□ 0.3
HLA-AP01891 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HLA-AP01891 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.91■□□□□ 0.3
HLA-AP01891 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HLA-AP01891 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-AP01891 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 AC055733.4-201ENST00000638462 1354 ntBASIC16.9■□□□□ 0.3
HLA-AP01891 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-AP01891 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-AP01891 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HLA-AP01891 TMEM179-206ENST00000616017 1645 ntBASIC16.9■□□□□ 0.3
HLA-AP01891 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.9■□□□□ 0.3
HLA-AP01891 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-AP01891 SLC47A1P1-202ENST00000449666 945 ntBASIC16.9■□□□□ 0.3
HLA-AP01891 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
HLA-AP01891 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.9■□□□□ 0.3
HLA-AP01891 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HLA-AP01891 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-AP01891 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
HLA-AP01891 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-AP01891 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
HLA-AP01891 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-AP01891 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-AP01891 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-AP01891 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.89■□□□□ 0.3
HLA-AP01891 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-AP01891 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.89■□□□□ 0.3
HLA-AP01891 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-AP01891 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-AP01891 LETM1P2-201ENST00000597330 2178 ntBASIC16.89■□□□□ 0.3
HLA-AP01891 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-AP01891 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-AP01891 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
HLA-AP01891 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-AP01891 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-AP01891 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HLA-AP01891 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-AP01891 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-AP01891 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.89■□□□□ 0.29
HLA-AP01891 SMUG1P1-201ENST00000590640 811 ntBASIC16.89■□□□□ 0.29
HLA-AP01891 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-AP01891 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-AP01891 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HLA-AP01891 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-AP01891 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-AP01891 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-AP01891 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-AP01891 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HLA-AP01891 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-AP01891 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-AP01891 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-AP01891 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-AP01891 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-AP01891 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-AP01891 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms