Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
CLDN1O95832 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN1O95832 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN1O95832 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN1O95832 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN1O95832 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN1O95832 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN1O95832 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.93■□□□□ 0.46
CLDN1O95832 AL137013.1-201ENST00000432946 1228 ntBASIC17.93■□□□□ 0.46
CLDN1O95832 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN1O95832 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN1O95832 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CLDN1O95832 AP000525.1-201ENST00000608286 694 ntBASIC17.93■□□□□ 0.46
CLDN1O95832 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN1O95832 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLDN1O95832 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN1O95832 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN1O95832 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN1O95832 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN1O95832 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN1O95832 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN1O95832 HTR7P1-201ENST00000538670 1336 ntBASIC17.93■□□□□ 0.46
CLDN1O95832 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN1O95832 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN1O95832 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN1O95832 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN1O95832 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLDN1O95832 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN1O95832 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN1O95832 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN1O95832 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN1O95832 AC073508.3-201ENST00000619697 1419 ntBASIC17.92■□□□□ 0.46
CLDN1O95832 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN1O95832 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN1O95832 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN1O95832 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN1O95832 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN1O95832 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN1O95832 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN1O95832 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.92■□□□□ 0.46
CLDN1O95832 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.92■□□□□ 0.46
CLDN1O95832 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN1O95832 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN1O95832 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN1O95832 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN1O95832 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN1O95832 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN1O95832 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN1O95832 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN1O95832 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLDN1O95832 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN1O95832 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLDN1O95832 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN1O95832 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 AC104076.2-201ENST00000448912 469 ntBASIC17.91■□□□□ 0.46
CLDN1O95832 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLDN1O95832 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN1O95832 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN1O95832 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN1O95832 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN1O95832 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN1O95832 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN1O95832 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN1O95832 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN1O95832 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN1O95832 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN1O95832 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN1O95832 AL137060.1-201ENST00000618151 2648 ntBASIC17.9■□□□□ 0.46
CLDN1O95832 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CLDN1O95832 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN1O95832 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN1O95832 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN1O95832 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN1O95832 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN1O95832 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN1O95832 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLDN1O95832 MIR1238-201ENST00000408483 83 ntBASIC17.9■□□□□ 0.46
CLDN1O95832 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.9■□□□□ 0.46
CLDN1O95832 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
CLDN1O95832 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.9■□□□□ 0.46
CLDN1O95832 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN1O95832 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN1O95832 AL121894.2-201ENST00000602977 491 ntBASIC17.9■□□□□ 0.46
CLDN1O95832 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.9■□□□□ 0.46
CLDN1O95832 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN1O95832 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.9■□□□□ 0.46
CLDN1O95832 FBXW4P1-201ENST00000426721 2239 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms