Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AC010141.2-201ENST00000452426 721 ntBASIC20.26■□□□□ 0.83
CDH16O75309 AL031432.3-201ENST00000607698 485 ntBASIC20.26■□□□□ 0.83
CDH16O75309 AL354811.1-201ENST00000610286 706 ntBASIC20.26■□□□□ 0.83
CDH16O75309 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CDH16O75309 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH16O75309 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.26■□□□□ 0.83
CDH16O75309 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH16O75309 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH16O75309 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH16O75309 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.26■□□□□ 0.83
CDH16O75309 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH16O75309 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.26■□□□□ 0.83
CDH16O75309 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CDH16O75309 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.25■□□□□ 0.83
CDH16O75309 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
CDH16O75309 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.25■□□□□ 0.83
CDH16O75309 MIR939-201ENST00000401314 82 ntBASIC20.25■□□□□ 0.83
CDH16O75309 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.25■□□□□ 0.83
CDH16O75309 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.25■□□□□ 0.83
CDH16O75309 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CDH16O75309 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.25■□□□□ 0.83
CDH16O75309 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.25■□□□□ 0.83
CDH16O75309 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.25■□□□□ 0.83
CDH16O75309 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CDH16O75309 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.25■□□□□ 0.83
CDH16O75309 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.25■□□□□ 0.83
CDH16O75309 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH16O75309 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDH16O75309 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CDH16O75309 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH16O75309 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.24■□□□□ 0.83
CDH16O75309 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH16O75309 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDH16O75309 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH16O75309 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH16O75309 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH16O75309 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.24■□□□□ 0.83
CDH16O75309 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH16O75309 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH16O75309 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH16O75309 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH16O75309 AL358852.1-201ENST00000623174 1268 ntBASIC20.24■□□□□ 0.83
CDH16O75309 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CDH16O75309 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CDH16O75309 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH16O75309 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CDH16O75309 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH16O75309 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH16O75309 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH16O75309 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.24■□□□□ 0.83
CDH16O75309 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH16O75309 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CDH16O75309 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH16O75309 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH16O75309 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH16O75309 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH16O75309 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH16O75309 AF213884.3-201ENST00000563833 479 ntBASIC20.23■□□□□ 0.83
CDH16O75309 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH16O75309 AL136967.2-201ENST00000623968 743 ntBASIC20.23■□□□□ 0.83
CDH16O75309 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH16O75309 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH16O75309 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDH16O75309 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.23■□□□□ 0.83
CDH16O75309 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.23■□□□□ 0.83
CDH16O75309 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH16O75309 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH16O75309 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH16O75309 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDH16O75309 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDH16O75309 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH16O75309 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH16O75309 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.22■□□□□ 0.83
CDH16O75309 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH16O75309 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH16O75309 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH16O75309 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDH16O75309 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDH16O75309 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDH16O75309 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH16O75309 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH16O75309 FAM21FP-204ENST00000608637 956 ntBASIC20.22■□□□□ 0.83
CDH16O75309 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH16O75309 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH16O75309 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH16O75309 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms