Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SYNCRIPO60506 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYNCRIPO60506 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYNCRIPO60506 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.51■□□□□ 0.87
SYNCRIPO60506 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.51■□□□□ 0.87
SYNCRIPO60506 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYNCRIPO60506 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNCRIPO60506 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.51■□□□□ 0.87
SYNCRIPO60506 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SYNCRIPO60506 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.51■□□□□ 0.87
SYNCRIPO60506 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.51■□□□□ 0.87
SYNCRIPO60506 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNCRIPO60506 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNCRIPO60506 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SYNCRIPO60506 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNCRIPO60506 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNCRIPO60506 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNCRIPO60506 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNCRIPO60506 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.5■□□□□ 0.87
SYNCRIPO60506 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.5■□□□□ 0.87
SYNCRIPO60506 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.5■□□□□ 0.87
SYNCRIPO60506 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNCRIPO60506 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.5■□□□□ 0.87
SYNCRIPO60506 MTDHP1-201ENST00000605323 784 ntBASIC20.5■□□□□ 0.87
SYNCRIPO60506 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.5■□□□□ 0.87
SYNCRIPO60506 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNCRIPO60506 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNCRIPO60506 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNCRIPO60506 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNCRIPO60506 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNCRIPO60506 AC073130.3-201ENST00000624389 2278 ntBASIC20.5■□□□□ 0.87
SYNCRIPO60506 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNCRIPO60506 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNCRIPO60506 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SYNCRIPO60506 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SYNCRIPO60506 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNCRIPO60506 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNCRIPO60506 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SYNCRIPO60506 AC239809.2-201ENST00000415381 517 ntBASIC20.49■□□□□ 0.87
SYNCRIPO60506 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.49■□□□□ 0.87
SYNCRIPO60506 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNCRIPO60506 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SYNCRIPO60506 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.49■□□□□ 0.87
SYNCRIPO60506 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.49■□□□□ 0.87
SYNCRIPO60506 AL023875.1-201ENST00000640777 796 ntBASIC20.49■□□□□ 0.87
SYNCRIPO60506 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNCRIPO60506 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNCRIPO60506 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SYNCRIPO60506 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
SYNCRIPO60506 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SYNCRIPO60506 AC027702.1-201ENST00000563810 1770 ntBASIC20.49■□□□□ 0.87
SYNCRIPO60506 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
SYNCRIPO60506 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNCRIPO60506 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNCRIPO60506 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.48■□□□□ 0.87
SYNCRIPO60506 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.48■□□□□ 0.87
SYNCRIPO60506 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SYNCRIPO60506 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SYNCRIPO60506 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNCRIPO60506 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SYNCRIPO60506 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNCRIPO60506 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SYNCRIPO60506 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SYNCRIPO60506 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SYNCRIPO60506 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.48■□□□□ 0.87
SYNCRIPO60506 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SYNCRIPO60506 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
SYNCRIPO60506 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SYNCRIPO60506 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNCRIPO60506 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNCRIPO60506 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.48■□□□□ 0.87
SYNCRIPO60506 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SYNCRIPO60506 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNCRIPO60506 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNCRIPO60506 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNCRIPO60506 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SYNCRIPO60506 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SYNCRIPO60506 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNCRIPO60506 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNCRIPO60506 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNCRIPO60506 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNCRIPO60506 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNCRIPO60506 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNCRIPO60506 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNCRIPO60506 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SYNCRIPO60506 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.47■□□□□ 0.87
SYNCRIPO60506 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYNCRIPO60506 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYNCRIPO60506 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYNCRIPO60506 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.47■□□□□ 0.87
SYNCRIPO60506 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
SYNCRIPO60506 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNCRIPO60506 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.47■□□□□ 0.87
SYNCRIPO60506 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNCRIPO60506 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYNCRIPO60506 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNCRIPO60506 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNCRIPO60506 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNCRIPO60506 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYNCRIPO60506 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms