Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 AC104187.1-201ENST00000607510 612 ntBASIC18.36■□□□□ 0.53
IDH3BO43837 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IDH3BO43837 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IDH3BO43837 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IDH3BO43837 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IDH3BO43837 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IDH3BO43837 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
IDH3BO43837 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IDH3BO43837 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.35■□□□□ 0.53
IDH3BO43837 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IDH3BO43837 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.35■□□□□ 0.53
IDH3BO43837 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.35■□□□□ 0.53
IDH3BO43837 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IDH3BO43837 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IDH3BO43837 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
IDH3BO43837 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.35■□□□□ 0.53
IDH3BO43837 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.35■□□□□ 0.53
IDH3BO43837 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
IDH3BO43837 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
IDH3BO43837 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
IDH3BO43837 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IDH3BO43837 SLC7A5P1-201ENST00000568957 537 ntBASIC18.35■□□□□ 0.53
IDH3BO43837 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.35■□□□□ 0.53
IDH3BO43837 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.35■□□□□ 0.53
IDH3BO43837 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.35■□□□□ 0.53
IDH3BO43837 AC243732.1-201ENST00000612648 864 ntBASIC18.35■□□□□ 0.53
IDH3BO43837 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IDH3BO43837 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.35■□□□□ 0.53
IDH3BO43837 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IDH3BO43837 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
IDH3BO43837 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IDH3BO43837 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IDH3BO43837 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IDH3BO43837 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
IDH3BO43837 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
IDH3BO43837 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
IDH3BO43837 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
IDH3BO43837 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
IDH3BO43837 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.34■□□□□ 0.53
IDH3BO43837 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.34■□□□□ 0.53
IDH3BO43837 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IDH3BO43837 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
IDH3BO43837 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.34■□□□□ 0.53
IDH3BO43837 SLC7A5P2-201ENST00000553010 536 ntBASIC18.34■□□□□ 0.53
IDH3BO43837 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.34■□□□□ 0.53
IDH3BO43837 TERF1P2-201ENST00000583350 1212 ntBASIC18.34■□□□□ 0.53
IDH3BO43837 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.34■□□□□ 0.53
IDH3BO43837 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
IDH3BO43837 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IDH3BO43837 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IDH3BO43837 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
IDH3BO43837 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IDH3BO43837 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IDH3BO43837 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
IDH3BO43837 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IDH3BO43837 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.33■□□□□ 0.53
IDH3BO43837 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IDH3BO43837 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
IDH3BO43837 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
IDH3BO43837 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
IDH3BO43837 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
IDH3BO43837 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.33■□□□□ 0.52
IDH3BO43837 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IDH3BO43837 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
IDH3BO43837 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.33■□□□□ 0.52
IDH3BO43837 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
IDH3BO43837 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
IDH3BO43837 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
IDH3BO43837 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
IDH3BO43837 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
IDH3BO43837 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IDH3BO43837 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IDH3BO43837 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
IDH3BO43837 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
IDH3BO43837 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
IDH3BO43837 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
IDH3BO43837 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IDH3BO43837 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IDH3BO43837 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
IDH3BO43837 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.32■□□□□ 0.52
IDH3BO43837 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.32■□□□□ 0.52
IDH3BO43837 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.32■□□□□ 0.52
IDH3BO43837 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IDH3BO43837 HCG11-201ENST00000411553 5696 ntBASIC18.32■□□□□ 0.52
IDH3BO43837 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IDH3BO43837 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
IDH3BO43837 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.32■□□□□ 0.52
IDH3BO43837 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IDH3BO43837 AC099778.1-201ENST00000568593 1911 ntBASIC18.32■□□□□ 0.52
IDH3BO43837 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
IDH3BO43837 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IDH3BO43837 YBX1P1-201ENST00000445822 960 ntBASIC18.32■□□□□ 0.52
IDH3BO43837 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.32■□□□□ 0.52
IDH3BO43837 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.32■□□□□ 0.52
IDH3BO43837 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IDH3BO43837 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IDH3BO43837 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IDH3BO43837 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IDH3BO43837 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IDH3BO43837 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms