Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 CDV3P1-201ENST00000471403 739 ntBASIC24.05■■□□□ 1.44
FOXN1O15353 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.05■■□□□ 1.44
FOXN1O15353 NAPSB-206ENST00000562112 1266 ntBASIC24.05■■□□□ 1.44
FOXN1O15353 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
FOXN1O15353 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
FOXN1O15353 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
FOXN1O15353 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
FOXN1O15353 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
FOXN1O15353 IPPK-202ENST00000375522 882 ntTSL 3 BASIC24.04■■□□□ 1.44
FOXN1O15353 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
FOXN1O15353 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC24.04■■□□□ 1.44
FOXN1O15353 FAM197Y1-201ENST00000421178 764 ntBASIC24.04■■□□□ 1.44
FOXN1O15353 ISCU-203ENST00000431221 799 ntTSL 2 BASIC24.04■■□□□ 1.44
FOXN1O15353 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC24.04■■□□□ 1.44
FOXN1O15353 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.04■■□□□ 1.44
FOXN1O15353 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC24.04■■□□□ 1.44
FOXN1O15353 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
FOXN1O15353 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
FOXN1O15353 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
FOXN1O15353 AC061975.6-201ENST00000579045 1553 ntBASIC24.03■■□□□ 1.44
FOXN1O15353 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC24.03■■□□□ 1.44
FOXN1O15353 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
FOXN1O15353 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.03■■□□□ 1.44
FOXN1O15353 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
FOXN1O15353 UNC93B2-201ENST00000285383 730 ntBASIC24.03■■□□□ 1.44
FOXN1O15353 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
FOXN1O15353 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
FOXN1O15353 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
FOXN1O15353 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
FOXN1O15353 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC24.03■■□□□ 1.44
FOXN1O15353 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
FOXN1O15353 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
FOXN1O15353 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
FOXN1O15353 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.02■■□□□ 1.44
FOXN1O15353 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
FOXN1O15353 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
FOXN1O15353 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
FOXN1O15353 FEM1AP4-201ENST00000443167 1987 ntBASIC24.02■■□□□ 1.44
FOXN1O15353 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
FOXN1O15353 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC24.02■■□□□ 1.44
FOXN1O15353 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
FOXN1O15353 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC24.02■■□□□ 1.44
FOXN1O15353 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
FOXN1O15353 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC24.02■■□□□ 1.44
FOXN1O15353 AC010947.1-201ENST00000623454 693 ntBASIC24.02■■□□□ 1.44
FOXN1O15353 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.02■■□□□ 1.43
FOXN1O15353 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.02■■□□□ 1.43
FOXN1O15353 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
FOXN1O15353 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.01■■□□□ 1.43
FOXN1O15353 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
FOXN1O15353 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
FOXN1O15353 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
FOXN1O15353 AC010203.1-204ENST00000548782 407 ntBASIC24.01■■□□□ 1.43
FOXN1O15353 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
FOXN1O15353 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
FOXN1O15353 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
FOXN1O15353 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
FOXN1O15353 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
FOXN1O15353 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
FOXN1O15353 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
FOXN1O15353 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.01■■□□□ 1.43
FOXN1O15353 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
FOXN1O15353 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24■■□□□ 1.43
FOXN1O15353 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
FOXN1O15353 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
FOXN1O15353 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC24■■□□□ 1.43
FOXN1O15353 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24■■□□□ 1.43
FOXN1O15353 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC24■■□□□ 1.43
FOXN1O15353 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
FOXN1O15353 AC009947.2-201ENST00000444014 672 ntBASIC24■■□□□ 1.43
FOXN1O15353 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC24■■□□□ 1.43
FOXN1O15353 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
FOXN1O15353 SRI-203ENST00000419179 1307 ntTSL 2 BASIC24■■□□□ 1.43
FOXN1O15353 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24■■□□□ 1.43
FOXN1O15353 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.99■■□□□ 1.43
FOXN1O15353 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
FOXN1O15353 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.99■■□□□ 1.43
FOXN1O15353 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
FOXN1O15353 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
FOXN1O15353 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.99■■□□□ 1.43
FOXN1O15353 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
FOXN1O15353 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC23.99■■□□□ 1.43
FOXN1O15353 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.99■■□□□ 1.43
FOXN1O15353 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
FOXN1O15353 GPALPP1-207ENST00000611650 899 ntBASIC23.99■■□□□ 1.43
FOXN1O15353 AC105020.6-201ENST00000621523 1217 ntBASIC23.99■■□□□ 1.43
FOXN1O15353 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
FOXN1O15353 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
FOXN1O15353 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
FOXN1O15353 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
FOXN1O15353 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
FOXN1O15353 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms