Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP3D1O14617 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
AP3D1O14617 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3D1O14617 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3D1O14617 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3D1O14617 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.72■□□□□ 0.59
AP3D1O14617 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3D1O14617 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP3D1O14617 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3D1O14617 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3D1O14617 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
AP3D1O14617 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.72■□□□□ 0.59
AP3D1O14617 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
AP3D1O14617 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.72■□□□□ 0.59
AP3D1O14617 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3D1O14617 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP3D1O14617 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.72■□□□□ 0.59
AP3D1O14617 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
AP3D1O14617 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3D1O14617 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3D1O14617 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3D1O14617 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP3D1O14617 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3D1O14617 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
AP3D1O14617 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3D1O14617 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
AP3D1O14617 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.71■□□□□ 0.59
AP3D1O14617 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AP3D1O14617 AC112907.3-201ENST00000577781 2400 ntBASIC18.71■□□□□ 0.59
AP3D1O14617 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3D1O14617 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
AP3D1O14617 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3D1O14617 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.71■□□□□ 0.59
AP3D1O14617 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3D1O14617 MIR935-201ENST00000401179 91 ntBASIC18.71■□□□□ 0.59
AP3D1O14617 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3D1O14617 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
AP3D1O14617 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3D1O14617 KRT18P11-201ENST00000435214 1283 ntBASIC18.71■□□□□ 0.59
AP3D1O14617 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AP3D1O14617 AC011767.1-201ENST00000617410 1153 ntBASIC18.71■□□□□ 0.59
AP3D1O14617 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.71■□□□□ 0.59
AP3D1O14617 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3D1O14617 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
AP3D1O14617 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3D1O14617 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3D1O14617 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
AP3D1O14617 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.71■□□□□ 0.59
AP3D1O14617 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3D1O14617 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
AP3D1O14617 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.7■□□□□ 0.58
AP3D1O14617 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.7■□□□□ 0.58
AP3D1O14617 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.7■□□□□ 0.58
AP3D1O14617 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
AP3D1O14617 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.7■□□□□ 0.58
AP3D1O14617 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
AP3D1O14617 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
AP3D1O14617 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
AP3D1O14617 AC006015.1-201ENST00000429970 570 ntBASIC18.7■□□□□ 0.58
AP3D1O14617 CDV3P1-201ENST00000471403 739 ntBASIC18.7■□□□□ 0.58
AP3D1O14617 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.7■□□□□ 0.58
AP3D1O14617 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.7■□□□□ 0.58
AP3D1O14617 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 FAM21FP-204ENST00000608637 956 ntBASIC18.7■□□□□ 0.58
AP3D1O14617 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
AP3D1O14617 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
AP3D1O14617 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3D1O14617 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
AP3D1O14617 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
AP3D1O14617 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3D1O14617 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
AP3D1O14617 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.69■□□□□ 0.58
AP3D1O14617 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3D1O14617 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.69■□□□□ 0.58
AP3D1O14617 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.69■□□□□ 0.58
AP3D1O14617 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.69■□□□□ 0.58
AP3D1O14617 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
AP3D1O14617 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3D1O14617 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.69■□□□□ 0.58
AP3D1O14617 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3D1O14617 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.69■□□□□ 0.58
AP3D1O14617 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3D1O14617 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3D1O14617 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3D1O14617 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3D1O14617 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
AP3D1O14617 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms