Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC188H7C350 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC188H7C350 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC188H7C350 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC188H7C350 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC188H7C350 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC188H7C350 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC188H7C350 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC188H7C350 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC188H7C350 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC188H7C350 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC188H7C350 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC188H7C350 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC188H7C350 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC188H7C350 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC188H7C350 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC188H7C350 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC188H7C350 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC188H7C350 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC188H7C350 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC188H7C350 AC004408.2-201ENST00000623613 2777 ntBASIC20.86■□□□□ 0.93
CCDC188H7C350 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CCDC188H7C350 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC188H7C350 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC188H7C350 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC188H7C350 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC188H7C350 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC188H7C350 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC188H7C350 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC188H7C350 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC188H7C350 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC188H7C350 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC188H7C350 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC188H7C350 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC188H7C350 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC188H7C350 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC188H7C350 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC188H7C350 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.85■□□□□ 0.93
CCDC188H7C350 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC188H7C350 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC188H7C350 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC188H7C350 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC188H7C350 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC188H7C350 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCDC188H7C350 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CCDC188H7C350 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC188H7C350 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC188H7C350 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC188H7C350 AC008406.3-201ENST00000620001 1374 ntBASIC20.85■□□□□ 0.93
CCDC188H7C350 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC188H7C350 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC188H7C350 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC188H7C350 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC188H7C350 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC188H7C350 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.84■□□□□ 0.93
CCDC188H7C350 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC188H7C350 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC188H7C350 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC188H7C350 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC188H7C350 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC188H7C350 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC188H7C350 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC188H7C350 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC188H7C350 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC188H7C350 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC188H7C350 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.84■□□□□ 0.93
CCDC188H7C350 SLC7A5P1-201ENST00000568957 537 ntBASIC20.84■□□□□ 0.93
CCDC188H7C350 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC188H7C350 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC188H7C350 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC188H7C350 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC188H7C350 AC009237.14-201ENST00000609975 1594 ntBASIC20.84■□□□□ 0.93
CCDC188H7C350 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC188H7C350 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC188H7C350 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC188H7C350 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC188H7C350 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC188H7C350 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC188H7C350 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC188H7C350 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC188H7C350 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC188H7C350 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC188H7C350 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC188H7C350 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC188H7C350 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC188H7C350 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CCDC188H7C350 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC188H7C350 PGM5P4-201ENST00000421970 445 ntBASIC20.83■□□□□ 0.93
CCDC188H7C350 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC188H7C350 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.83■□□□□ 0.93
CCDC188H7C350 AC131212.1-201ENST00000613771 668 ntBASIC20.83■□□□□ 0.93
CCDC188H7C350 AC110285.6-201ENST00000617652 491 ntBASIC20.83■□□□□ 0.93
CCDC188H7C350 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CCDC188H7C350 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC188H7C350 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC188H7C350 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC188H7C350 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
CCDC188H7C350 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC188H7C350 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC188H7C350 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms