Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 AL589743.5-201ENST00000616611 1050 ntBASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 AC112907.3-201ENST00000577781 2400 ntBASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-4A0A1B0GX49 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
TRBV6-4A0A1B0GX49 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 AC010980.2-201ENST00000587099 1412 ntBASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 AC005181.1-201ENST00000604782 1256 ntBASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 KRT8P17-201ENST00000453110 1448 ntBASIC14.15□□□□□ -0.14
TRBV6-4A0A1B0GX49 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TRBV6-4A0A1B0GX49 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TRBV6-4A0A1B0GX49 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV6-4A0A1B0GX49 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms