Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV27A0A0K0K1C4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 EDA-201ENST00000338901 1233 ntBASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 AC007322.3-201ENST00000426526 701 ntBASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 AP001330.3-201ENST00000520123 633 ntBASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 AC009237.14-201ENST00000609975 1594 ntBASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV27A0A0K0K1C4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 AC243732.1-201ENST00000612648 864 ntBASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV27A0A0K0K1C4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRBV27A0A0K0K1C4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms