Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC25.73■■□□□ 1.71
LOC102724428A0A0B4J2F2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
LOC102724428A0A0B4J2F2 HLA-G-202ENST00000376815 851 ntBASIC25.73■■□□□ 1.71
LOC102724428A0A0B4J2F2 HLA-G-203ENST00000376818 1127 ntBASIC25.73■■□□□ 1.71
LOC102724428A0A0B4J2F2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LOC102724428A0A0B4J2F2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LOC102724428A0A0B4J2F2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
LOC102724428A0A0B4J2F2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LOC102724428A0A0B4J2F2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC25.73■■□□□ 1.71
LOC102724428A0A0B4J2F2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LOC102724428A0A0B4J2F2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.71■■□□□ 1.71
LOC102724428A0A0B4J2F2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LOC102724428A0A0B4J2F2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
LOC102724428A0A0B4J2F2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
LOC102724428A0A0B4J2F2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC25.71■■□□□ 1.71
LOC102724428A0A0B4J2F2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC25.71■■□□□ 1.71
LOC102724428A0A0B4J2F2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC25.71■■□□□ 1.71
LOC102724428A0A0B4J2F2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
LOC102724428A0A0B4J2F2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC25.71■■□□□ 1.71
LOC102724428A0A0B4J2F2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
LOC102724428A0A0B4J2F2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LOC102724428A0A0B4J2F2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LOC102724428A0A0B4J2F2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
LOC102724428A0A0B4J2F2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
LOC102724428A0A0B4J2F2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LOC102724428A0A0B4J2F2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
LOC102724428A0A0B4J2F2 AC010203.1-204ENST00000548782 407 ntBASIC25.7■■□□□ 1.7
LOC102724428A0A0B4J2F2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.7■■□□□ 1.7
LOC102724428A0A0B4J2F2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
LOC102724428A0A0B4J2F2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LOC102724428A0A0B4J2F2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
LOC102724428A0A0B4J2F2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
LOC102724428A0A0B4J2F2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
LOC102724428A0A0B4J2F2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
LOC102724428A0A0B4J2F2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC25.69■■□□□ 1.7
LOC102724428A0A0B4J2F2 MESTP1-201ENST00000404287 994 ntBASIC25.69■■□□□ 1.7
LOC102724428A0A0B4J2F2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC25.69■■□□□ 1.7
LOC102724428A0A0B4J2F2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC25.69■■□□□ 1.7
LOC102724428A0A0B4J2F2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.69■■□□□ 1.7
LOC102724428A0A0B4J2F2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.69■■□□□ 1.7
LOC102724428A0A0B4J2F2 ECEL1P1-201ENST00000373592 1742 ntBASIC25.68■■□□□ 1.7
LOC102724428A0A0B4J2F2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
LOC102724428A0A0B4J2F2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
LOC102724428A0A0B4J2F2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LOC102724428A0A0B4J2F2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC25.68■■□□□ 1.7
LOC102724428A0A0B4J2F2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC25.68■■□□□ 1.7
LOC102724428A0A0B4J2F2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
LOC102724428A0A0B4J2F2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC25.68■■□□□ 1.7
LOC102724428A0A0B4J2F2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
LOC102724428A0A0B4J2F2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC25.68■■□□□ 1.7
LOC102724428A0A0B4J2F2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
LOC102724428A0A0B4J2F2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LOC102724428A0A0B4J2F2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LOC102724428A0A0B4J2F2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LOC102724428A0A0B4J2F2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
LOC102724428A0A0B4J2F2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC25.67■■□□□ 1.7
LOC102724428A0A0B4J2F2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
LOC102724428A0A0B4J2F2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LOC102724428A0A0B4J2F2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.67■■□□□ 1.7
LOC102724428A0A0B4J2F2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.67■■□□□ 1.7
LOC102724428A0A0B4J2F2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
LOC102724428A0A0B4J2F2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC25.67■■□□□ 1.7
LOC102724428A0A0B4J2F2 AC244015.2-201ENST00000616358 1861 ntBASIC25.67■■□□□ 1.7
LOC102724428A0A0B4J2F2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LOC102724428A0A0B4J2F2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 KRT8P20-201ENST00000423953 1409 ntBASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 AL031985.4-201ENST00000642138 673 ntBASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.66■■□□□ 1.7
LOC102724428A0A0B4J2F2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LOC102724428A0A0B4J2F2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms