Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 RNA5SP413-201ENST00000516373 109 ntBASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 AC023632.3-201ENST00000521633 145 ntBASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 KRT18P6-201ENST00000555540 1265 ntBASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 SMG8-203ENST00000578922 2178 ntBASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV41A0A0B4J266 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 KRT8P20-201ENST00000423953 1409 ntBASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 PNMA6B-201ENST00000538162 1200 ntBASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 AL031963.3-201ENST00000606441 850 ntBASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 LINC01006-201ENST00000333319 2292 ntBASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV41A0A0B4J266 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 KRT8P17-201ENST00000453110 1448 ntBASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV41A0A0B4J266 AL157384.1-201ENST00000445995 2473 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms