Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 AP005435.1-201ENST00000529293 1178 ntBASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 AC010525.1-201ENST00000585559 441 ntBASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV12-1A0A0B4J245 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
TRAV12-1A0A0B4J245 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
TRAV12-1A0A0B4J245 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV12-1A0A0B4J245 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.08□□□□□ -0.15
TRAV12-1A0A0B4J245 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.08□□□□□ -0.15
TRAV12-1A0A0B4J245 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV12-1A0A0B4J245 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 BX119927.1-201ENST00000636596 1552 ntBASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-1A0A0B4J245 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 YBX1P4-201ENST00000392794 808 ntBASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 ATP5G2P3-201ENST00000429083 425 ntBASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 AC103834.1-201ENST00000520383 144 ntBASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 MIR3181-201ENST00000578512 73 ntBASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 MIR2861-201ENST00000636310 90 ntBASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-1A0A0B4J245 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms