Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
UBE3AQ05086 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
UBE3AQ05086 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
UBE3AQ05086 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
UBE3AQ05086 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
UBE3AQ05086 AL365475.1-201ENST00000565135 1949 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
UBE3AQ05086 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
UBE3AQ05086 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.13□□□□□ -1.11
UBE3AQ05086 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
UBE3AQ05086 AP000941.1-201ENST00000530198 1388 ntTSL 3 BASIC8.13□□□□□ -1.11
UBE3AQ05086 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
UBE3AQ05086 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.13□□□□□ -1.11
UBE3AQ05086 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
UBE3AQ05086 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
UBE3AQ05086 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
UBE3AQ05086 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
UBE3AQ05086 AC023886.2-201ENST00000321285 411 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
UBE3AQ05086 CAPNS1P1-201ENST00000401029 633 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 COX6A1P3-201ENST00000404167 293 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC8.13□□□□□ -1.11
UBE3AQ05086 AC023141.10-201ENST00000415634 200 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 SNX18P3-201ENST00000424993 835 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 E2F6P1-201ENST00000428850 745 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC8.13□□□□□ -1.11
UBE3AQ05086 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC8.13□□□□□ -1.11
UBE3AQ05086 RN7SL233P-201ENST00000469988 277 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 NDUFS5P2-201ENST00000484004 306 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 RN7SL612P-201ENST00000497704 295 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 UGT2B29P-201ENST00000509021 973 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 CFI-204ENST00000510800 667 ntTSL 2 BASIC8.13□□□□□ -1.11
UBE3AQ05086 AC108471.2-205ENST00000529314 628 ntTSL 3 BASIC8.13□□□□□ -1.11
UBE3AQ05086 AP006587.5-201ENST00000532033 739 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC8.13□□□□□ -1.11
UBE3AQ05086 AC105036.1-201ENST00000566222 271 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 CUX2P1-201ENST00000606426 298 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 RN7SL778P-201ENST00000607160 297 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 AL121782.1-201ENST00000611242 413 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 AC048341.3-201ENST00000619323 491 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
UBE3AQ05086 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
UBE3AQ05086 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
UBE3AQ05086 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
UBE3AQ05086 OR8B9P-202ENST00000642028 5216 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
UBE3AQ05086 AC087203.2-201ENST00000526502 1587 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.13□□□□□ -1.11
UBE3AQ05086 AC130464.1-201ENST00000416201 1500 ntBASIC8.13□□□□□ -1.11
UBE3AQ05086 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
UBE3AQ05086 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.13□□□□□ -1.11
UBE3AQ05086 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
UBE3AQ05086 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC8.12□□□□□ -1.11
UBE3AQ05086 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 EEF1A1P22-201ENST00000559385 1380 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 AC009090.4-201ENST00000623921 3691 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 RN7SKP208-201ENST00000365474 361 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 SSX9-201ENST00000376909 591 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 AC090114.1-201ENST00000393266 448 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 OR52N3P-201ENST00000413417 934 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 AL359633.1-201ENST00000421403 310 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 CYP4F34P-201ENST00000425951 481 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 OSTCP2-201ENST00000437956 444 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC8.12□□□□□ -1.11
UBE3AQ05086 AC019080.2-201ENST00000453859 394 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 AC025271.1-201ENST00000485045 429 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 AK6-203ENST00000502819 743 ntTSL 5 BASIC8.12□□□□□ -1.11
UBE3AQ05086 GAPDHP61-201ENST00000507324 1005 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC8.12□□□□□ -1.11
UBE3AQ05086 RN7SKP105-201ENST00000517192 314 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 IGLVIV-59-201ENST00000520218 250 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 CTHRC1-203ENST00000520337 1198 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 AC130366.1-201ENST00000526505 1192 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 PHBP2-201ENST00000532859 806 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC8.12□□□□□ -1.11
UBE3AQ05086 ARGFXP2-201ENST00000579304 949 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.12□□□□□ -1.11
UBE3AQ05086 AC005070.1-201ENST00000603744 365 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 AC005899.6-201ENST00000620729 297 ntBASIC8.12□□□□□ -1.11
UBE3AQ05086 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC8.12□□□□□ -1.11
UBE3AQ05086 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
UBE3AQ05086 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
UBE3AQ05086 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
UBE3AQ05086 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
UBE3AQ05086 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms