RNA–Protein interactions for RNA: ENST00000401029.3

CAPNS1P1-201, Transcript of calpain small subunit 1 pseudogene 1, humanhuman

BASIC

Gene CAPNS1P1, Length 633 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P1-201ENST00000401029 AEBP2Q6ZN18 517 aaPredicted RBP21.16■□□□□ 0.98
CAPNS1P1-201ENST00000401029 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
CAPNS1P1-201ENST00000401029 SENP3Q9H4L4 574 aaPredicted RBP18.28■□□□□ 0.52
CAPNS1P1-201ENST00000401029 PHF23Q9BUL5 403 aaPredicted RBP17.9■□□□□ 0.46
CAPNS1P1-201ENST00000401029 NISCHQ9Y2I1 1504 aa17.85■□□□□ 0.45
CAPNS1P1-201ENST00000401029 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
CAPNS1P1-201ENST00000401029 FOXD1Q16676 465 aa17.11■□□□□ 0.33
CAPNS1P1-201ENST00000401029 PLPPR3Q6T4P5 718 aa16.56■□□□□ 0.24
CAPNS1P1-201ENST00000401029 MSH5O43196 834 aa16.43■□□□□ 0.22
CAPNS1P1-201ENST00000401029 PIAS4Q8N2W9 510 aaPredicted RBP15.87■□□□□ 0.13
CAPNS1P1-201ENST00000401029 PPP6R1Q9UPN7 881 aa15.56■□□□□ 0.08
CAPNS1P1-201ENST00000401029 ADRA2BP18089 450 aa15.47■□□□□ 0.07
CAPNS1P1-201ENST00000401029 CCDC180Q9P1Z9 1646 aa15.29■□□□□ 0.04
CAPNS1P1-201ENST00000401029 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
CAPNS1P1-201ENST00000401029 DCAF1Q9Y4B6 1507 aa14.84□□□□□ -0.03
CAPNS1P1-201ENST00000401029 KCNA4P22459 653 aa14.78□□□□□ -0.04
CAPNS1P1-201ENST00000401029 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
CAPNS1P1-201ENST00000401029 SHROOM4Q9ULL8 1493 aa14.73□□□□□ -0.05
CAPNS1P1-201ENST00000401029 PPP4R3CPQ6ZMV5 832 aa14.61□□□□□ -0.07
CAPNS1P1-201ENST00000401029 DCAF8L2P0C7V8 631 aa14.55□□□□□ -0.08
CAPNS1P1-201ENST00000401029 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
CAPNS1P1-201ENST00000401029 SUPT5HO00267 1087 aaKnown RBP14.48□□□□□ -0.09
CAPNS1P1-201ENST00000401029 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
CAPNS1P1-201ENST00000401029 DMRT2Q9Y5R5 561 aa14.3□□□□□ -0.12
CAPNS1P1-201ENST00000401029 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
CAPNS1P1-201ENST00000401029 EHMT2Q96KQ7 1210 aa14.22□□□□□ -0.13
CAPNS1P1-201ENST00000401029 NACADO15069 1562 aa14.22□□□□□ -0.13
CAPNS1P1-201ENST00000401029 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
CAPNS1P1-201ENST00000401029 NPM3O75607 178 aaKnown RBP14.17□□□□□ -0.14
CAPNS1P1-201ENST00000401029 SLC4A1APQ9BWU0 796 aaKnown RBP14.17□□□□□ -0.14
CAPNS1P1-201ENST00000401029 CNKSR2Q8WXI2 1034 aa14.14□□□□□ -0.15
CAPNS1P1-201ENST00000401029 ABCC9O60706 1549 aa14.1□□□□□ -0.15
CAPNS1P1-201ENST00000401029 RSF1Q96T23 1441 aaPredicted RBP14.05□□□□□ -0.16
CAPNS1P1-201ENST00000401029 SCRIBQ14160 1630 aa14.03□□□□□ -0.16
CAPNS1P1-201ENST00000401029 DCAF8L1A6NGE4 600 aa14.01□□□□□ -0.17
CAPNS1P1-201ENST00000401029 RB1CC1Q8TDY2 1594 aa13.93□□□□□ -0.18
CAPNS1P1-201ENST00000401029 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
CAPNS1P1-201ENST00000401029 RNF39Q9H2S5 420 aa13.87□□□□□ -0.19
CAPNS1P1-201ENST00000401029 DNAJC5BQ9UF47 199 aa13.86□□□□□ -0.19
CAPNS1P1-201ENST00000401029 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
CAPNS1P1-201ENST00000401029 MROH2BQ7Z745 1585 aa13.77□□□□□ -0.21
CAPNS1P1-201ENST00000401029 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
CAPNS1P1-201ENST00000401029 BAZ1AQ9NRL2 1556 aaPredicted RBP13.72□□□□□ -0.21
CAPNS1P1-201ENST00000401029 TRIM41Q8WV44 630 aa13.66□□□□□ -0.22
CAPNS1P1-201ENST00000401029 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
CAPNS1P1-201ENST00000401029 POTEHQ6S545 545 aa13.64□□□□□ -0.23
CAPNS1P1-201ENST00000401029 LOC105371045A0A1W2PR82 267 aa13.62□□□□□ -0.23
CAPNS1P1-201ENST00000401029 ZBTB22O15209 634 aa13.62□□□□□ -0.23
CAPNS1P1-201ENST00000401029 WIZO95785 1651 aa13.62□□□□□ -0.23
CAPNS1P1-201ENST00000401029 HOXD11P31277 338 aaPredicted RBP13.61□□□□□ -0.23
CAPNS1P1-201ENST00000401029 SMARCA4P51532 1647 aa13.56□□□□□ -0.24
CAPNS1P1-201ENST00000401029 TOP2AP11388 1531 aaKnown RBP13.54□□□□□ -0.24
CAPNS1P1-201ENST00000401029 UNC13AQ9UPW8 1703 aa13.54□□□□□ -0.24
CAPNS1P1-201ENST00000401029 FOXD4L1Q9NU39 408 aa13.52□□□□□ -0.25
CAPNS1P1-201ENST00000401029 BICRAQ9NZM4 1560 aa13.51□□□□□ -0.25
CAPNS1P1-201ENST00000401029 HRCP23327 699 aa13.49□□□□□ -0.25
CAPNS1P1-201ENST00000401029 EIF4G1Q04637 1599 aaKnown RBP13.46□□□□□ -0.25
CAPNS1P1-201ENST00000401029 PEG3Q9GZU2 1588 aa13.46□□□□□ -0.25
CAPNS1P1-201ENST00000401029 CCDC88BA6NC98 1476 aa13.46□□□□□ -0.25
CAPNS1P1-201ENST00000401029 PCGF6Q9BYE7 350 aa13.44□□□□□ -0.26
CAPNS1P1-201ENST00000401029 TRIM26Q12899 539 aaPredicted RBP13.43□□□□□ -0.26
CAPNS1P1-201ENST00000401029 SMARCA2P51531 1590 aa13.42□□□□□ -0.26
CAPNS1P1-201ENST00000401029 PABPN1Q86U42 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
CAPNS1P1-201ENST00000401029 FAM9AQ8IZU1 332 aaPredicted RBP13.32□□□□□ -0.28
CAPNS1P1-201ENST00000401029 ATAD2BQ9ULI0 1458 aa13.3□□□□□ -0.28
CAPNS1P1-201ENST00000401029 EEA1Q15075 1411 aa13.29□□□□□ -0.28
CAPNS1P1-201ENST00000401029 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
CAPNS1P1-201ENST00000401029 BAZ1BQ9UIG0 1483 aaKnown RBP13.19□□□□□ -0.3
CAPNS1P1-201ENST00000401029 ABCC8Q09428 1581 aa13.19□□□□□ -0.3
CAPNS1P1-201ENST00000401029 NCAPD3P42695 1498 aa13.18□□□□□ -0.3
CAPNS1P1-201ENST00000401029 ZEB1P37275 1124 aaPredicted RBP13.18□□□□□ -0.3
CAPNS1P1-201ENST00000401029 TNIKQ9UKE5 1360 aa13.18□□□□□ -0.3
CAPNS1P1-201ENST00000401029 WRNQ14191 1432 aaPredicted RBP eCLIP13.17□□□□□ -0.3
CAPNS1P1-201ENST00000401029 SOGA1O94964 1423 aa13.13□□□□□ -0.31
CAPNS1P1-201ENST00000401029 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
CAPNS1P1-201ENST00000401029 HMGXB3Q12766 1538 aa13.1□□□□□ -0.31
CAPNS1P1-201ENST00000401029 ATXN8OSP0DMR3 200 aa13.06□□□□□ -0.32
CAPNS1P1-201ENST00000401029 RUSC2Q8N2Y8 1516 aa13.04□□□□□ -0.32
CAPNS1P1-201ENST00000401029 GOLGA3Q08378 1498 aa13.04□□□□□ -0.32
CAPNS1P1-201ENST00000401029 CEP162Q5TB80 1403 aa13.03□□□□□ -0.32
CAPNS1P1-201ENST00000401029 SYNJ1O43426 1573 aa13.02□□□□□ -0.33
CAPNS1P1-201ENST00000401029 CEP164Q9UPV0 1460 aa13.01□□□□□ -0.33
CAPNS1P1-201ENST00000401029 KIF21BO75037 1637 aa12.99□□□□□ -0.33
CAPNS1P1-201ENST00000401029 TOP2BQ02880 1626 aa12.99□□□□□ -0.33
CAPNS1P1-201ENST00000401029 UBTFP17480 764 aaKnown RBP12.98□□□□□ -0.33
CAPNS1P1-201ENST00000401029 PPARGC1BQ86YN6 1023 aaKnown RBP12.98□□□□□ -0.33
CAPNS1P1-201ENST00000401029 CFTRP13569 1480 aa12.97□□□□□ -0.33
CAPNS1P1-201ENST00000401029 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
CAPNS1P1-201ENST00000401029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.34
CAPNS1P1-201ENST00000401029 PRXQ9BXM0 1461 aa12.87□□□□□ -0.35
CAPNS1P1-201ENST00000401029 ERICH3Q5RHP9 1530 aa12.86□□□□□ -0.35
CAPNS1P1-201ENST00000401029 CLIP1P30622 1438 aa12.86□□□□□ -0.35
CAPNS1P1-201ENST00000401029 CADPSQ9ULU8 1353 aa12.85□□□□□ -0.35
CAPNS1P1-201ENST00000401029 CUX1P39880 1505 aa12.83□□□□□ -0.35
CAPNS1P1-201ENST00000401029 RAPGEF2Q9Y4G8 1499 aa12.83□□□□□ -0.36
CAPNS1P1-201ENST00000401029 KIF27Q86VH2 1401 aa12.82□□□□□ -0.36
CAPNS1P1-201ENST00000401029 VPS8Q8N3P4 1428 aa12.82□□□□□ -0.36
CAPNS1P1-201ENST00000401029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.81□□□□□ -0.36
CAPNS1P1-201ENST00000401029 HNRNPUL2Q1KMD3 747 aaKnown RBP12.81□□□□□ -0.36
CAPNS1P1-201ENST00000401029 SAMD1Q6SPF0 538 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms