RNA–Protein interactions for RNA: ENST00000366496.6

NLRP3-203, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-203ENST00000366496 NISCHQ9Y2I1 1504 aa15.45■□□□□ 0.06
NLRP3-203ENST00000366496 DCAF8L2P0C7V8 631 aa14.51□□□□□ -0.09
NLRP3-203ENST00000366496 PELP1Q8IZL8 1130 aaKnown RBP14.21□□□□□ -0.14
NLRP3-203ENST00000366496 SHROOM4Q9ULL8 1493 aa14.14□□□□□ -0.15
NLRP3-203ENST00000366496 SUPT5HO00267 1087 aaKnown RBP13.97□□□□□ -0.17
NLRP3-203ENST00000366496 MYT1Q01538 1121 aa13.89□□□□□ -0.19
NLRP3-203ENST00000366496 HRCP23327 699 aa13.75□□□□□ -0.21
NLRP3-203ENST00000366496 ABCC9O60706 1549 aa13.65□□□□□ -0.22
NLRP3-203ENST00000366496 PCGF6Q9BYE7 350 aa13.38□□□□□ -0.27
NLRP3-203ENST00000366496 PPARGC1BQ86YN6 1023 aaKnown RBP13.37□□□□□ -0.27
NLRP3-203ENST00000366496 EHMT2Q96KQ7 1210 aa13.31□□□□□ -0.28
NLRP3-203ENST00000366496 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.3
NLRP3-203ENST00000366496 CCDC180Q9P1Z9 1646 aa13.09□□□□□ -0.31
NLRP3-203ENST00000366496 FAM9AQ8IZU1 332 aaPredicted RBP13.09□□□□□ -0.31
NLRP3-203ENST00000366496 TTBK1Q5TCY1 1321 aaPredicted RBP13.08□□□□□ -0.31
NLRP3-203ENST00000366496 ZEB1P37275 1124 aaPredicted RBP13.04□□□□□ -0.32
NLRP3-203ENST00000366496 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
NLRP3-203ENST00000366496 CENPBP07199 599 aaPredicted RBP12.94□□□□□ -0.34
NLRP3-203ENST00000366496 ZCCHC6Q5VYS8 1495 aaKnown RBP12.89□□□□□ -0.35
NLRP3-203ENST00000366496 CHIC1Q5VXU3 224 aa12.88□□□□□ -0.35
NLRP3-203ENST00000366496 ACIN1Q9UKV3 1341 aaKnown RBP12.86□□□□□ -0.35
NLRP3-203ENST00000366496 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
NLRP3-203ENST00000366496 TRIM26Q12899 539 aaPredicted RBP12.84□□□□□ -0.35
NLRP3-203ENST00000366496 GTF3C3Q9Y5Q9 886 aa12.81□□□□□ -0.36
NLRP3-203ENST00000366496 LOC105371045A0A1W2PR82 267 aa12.8□□□□□ -0.36
NLRP3-203ENST00000366496 RB1CC1Q8TDY2 1594 aa12.74□□□□□ -0.37
NLRP3-203ENST00000366496 NEUROD1Q13562 356 aa12.71□□□□□ -0.38
NLRP3-203ENST00000366496 DCAF1Q9Y4B6 1507 aa12.68□□□□□ -0.38
NLRP3-203ENST00000366496 RANGAP1P46060 587 aaPredicted RBP12.67□□□□□ -0.38
NLRP3-203ENST00000366496 SCRIBQ14160 1630 aa12.64□□□□□ -0.39
NLRP3-203ENST00000366496 MYO15BQ96JP2 1530 aa12.63□□□□□ -0.39
NLRP3-203ENST00000366496 BCL11AQ9H165 835 aa12.62□□□□□ -0.39
NLRP3-203ENST00000366496 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
NLRP3-203ENST00000366496 NACADO15069 1562 aa12.58□□□□□ -0.4
NLRP3-203ENST00000366496 UBTFP17480 764 aaKnown RBP12.49□□□□□ -0.41
NLRP3-203ENST00000366496 DIEXFQ68CQ4 756 aaKnown RBP12.49□□□□□ -0.41
NLRP3-203ENST00000366496 ERICH6Q7L0X2 663 aa12.46□□□□□ -0.41
NLRP3-203ENST00000366496 YTHDC1Q96MU7 727 aaKnown RBP12.44□□□□□ -0.42
NLRP3-203ENST00000366496 CCER1Q8TC90 406 aaPredicted RBP12.4□□□□□ -0.42
NLRP3-203ENST00000366496 ANP32EQ9BTT0 268 aa12.4□□□□□ -0.42
NLRP3-203ENST00000366496 PRKCSHP14314 528 aaPredicted RBP12.36□□□□□ -0.43
NLRP3-203ENST00000366496 APLP2Q06481 763 aa12.35□□□□□ -0.43
NLRP3-203ENST00000366496 RSF1Q96T23 1441 aaPredicted RBP12.33□□□□□ -0.44
NLRP3-203ENST00000366496 CECR2Q9BXF3 1484 aa12.29□□□□□ -0.44
NLRP3-203ENST00000366496 ATP1B4Q9UN42 357 aaPredicted RBP12.26□□□□□ -0.45
NLRP3-203ENST00000366496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.22□□□□□ -0.45
NLRP3-203ENST00000366496 CLSPNQ9HAW4 1339 aa12.19□□□□□ -0.46
NLRP3-203ENST00000366496 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
NLRP3-203ENST00000366496 ZNF316A6NFI3 1004 aaPredicted RBP12.13□□□□□ -0.47
NLRP3-203ENST00000366496 MROH2BQ7Z745 1585 aa12.1□□□□□ -0.47
NLRP3-203ENST00000366496 HNRNPUL2Q1KMD3 747 aaKnown RBP12.1□□□□□ -0.47
NLRP3-203ENST00000366496 BICRAQ9NZM4 1560 aa12.08□□□□□ -0.48
NLRP3-203ENST00000366496 ITGAEP38570 1179 aa12.08□□□□□ -0.48
NLRP3-203ENST00000366496 TSHZ2Q9NRE2 1034 aa12.04□□□□□ -0.48
NLRP3-203ENST00000366496 UNC13AQ9UPW8 1703 aa12.02□□□□□ -0.49
NLRP3-203ENST00000366496 SUPT16HQ9Y5B9 1047 aaKnown RBP12.01□□□□□ -0.49
NLRP3-203ENST00000366496 CC2D2AQ9P2K1 1620 aa12.01□□□□□ -0.49
NLRP3-203ENST00000366496 MIER1Q8N108 512 aa12□□□□□ -0.49
NLRP3-203ENST00000366496 EIF4G1Q04637 1599 aaKnown RBP11.99□□□□□ -0.49
NLRP3-203ENST00000366496 WIZO95785 1651 aa11.96□□□□□ -0.5
NLRP3-203ENST00000366496 BAZ1AQ9NRL2 1556 aaPredicted RBP11.94□□□□□ -0.5
NLRP3-203ENST00000366496 MYT1LQ9UL68 1186 aa11.94□□□□□ -0.5
NLRP3-203ENST00000366496 ERCC6Q03468 1493 aa11.93□□□□□ -0.5
NLRP3-203ENST00000366496 P3H3Q8IVL6 736 aa11.93□□□□□ -0.5
NLRP3-203ENST00000366496 NEFLP07196 543 aa11.93□□□□□ -0.5
NLRP3-203ENST00000366496 BCANQ96GW7 911 aa11.89□□□□□ -0.51
NLRP3-203ENST00000366496 CCDC88BA6NC98 1476 aa11.88□□□□□ -0.51
NLRP3-203ENST00000366496 ABCC8Q09428 1581 aa11.87□□□□□ -0.51
NLRP3-203ENST00000366496 BAZ1BQ9UIG0 1483 aaKnown RBP11.86□□□□□ -0.51
NLRP3-203ENST00000366496 SOGA1O94964 1423 aa11.85□□□□□ -0.51
NLRP3-203ENST00000366496 WRNQ14191 1432 aaPredicted RBP eCLIP11.82□□□□□ -0.52
NLRP3-203ENST00000366496 ARID3CA6NKF2 412 aa11.81□□□□□ -0.52
NLRP3-203ENST00000366496 RBM19Q9Y4C8 960 aaKnown RBP11.79□□□□□ -0.52
NLRP3-203ENST00000366496 FAM50AQ14320 339 aaKnown RBP11.78□□□□□ -0.52
NLRP3-203ENST00000366496 FKBP8Q14318 412 aa11.76□□□□□ -0.53
NLRP3-203ENST00000366496 FBLN2P98095 1184 aa11.75□□□□□ -0.53
NLRP3-203ENST00000366496 CEP162Q5TB80 1403 aa11.74□□□□□ -0.53
NLRP3-203ENST00000366496 ANO8Q9HCE9 1232 aaPredicted RBP11.74□□□□□ -0.53
NLRP3-203ENST00000366496 DEKP35659 375 aaKnown RBP11.73□□□□□ -0.53
NLRP3-203ENST00000366496 SMARCA4P51532 1647 aa11.72□□□□□ -0.53
NLRP3-203ENST00000366496 TOP2AP11388 1531 aaKnown RBP11.7□□□□□ -0.54
NLRP3-203ENST00000366496 ATAD2BQ9ULI0 1458 aa11.7□□□□□ -0.54
NLRP3-203ENST00000366496 RUSC2Q8N2Y8 1516 aa11.69□□□□□ -0.54
NLRP3-203ENST00000366496 ERICH6BQ5W0A0 696 aa11.69□□□□□ -0.54
NLRP3-203ENST00000366496 CLIP1P30622 1438 aa11.69□□□□□ -0.54
NLRP3-203ENST00000366496 RTL5Q5HYW3 569 aaPredicted RBP11.68□□□□□ -0.54
NLRP3-203ENST00000366496 CDK11AQ9UQ88 783 aaPredicted RBP11.68□□□□□ -0.54
NLRP3-203ENST00000366496 SMARCA2P51531 1590 aa11.67□□□□□ -0.54
NLRP3-203ENST00000366496 NCAPD3P42695 1498 aa11.65□□□□□ -0.54
NLRP3-203ENST00000366496 GOLGA3Q08378 1498 aa11.64□□□□□ -0.55
NLRP3-203ENST00000366496 TNIKQ9UKE5 1360 aa11.63□□□□□ -0.55
NLRP3-203ENST00000366496 NESP48681 1621 aa11.6□□□□□ -0.55
NLRP3-203ENST00000366496 PDS5BQ9NTI5 1447 aa11.59□□□□□ -0.55
NLRP3-203ENST00000366496 CCDC136Q96JN2 1154 aa11.59□□□□□ -0.55
NLRP3-203ENST00000366496 DNAJC5Q9H3Z4 198 aa11.59□□□□□ -0.55
NLRP3-203ENST00000366496 EEA1Q15075 1411 aa11.59□□□□□ -0.55
NLRP3-203ENST00000366496 FANCIQ9NVI1 1328 aa11.59□□□□□ -0.55
NLRP3-203ENST00000366496 CNGB1Q14028 1251 aaPredicted RBP11.58□□□□□ -0.56
NLRP3-203ENST00000366496 SALL2Q9Y467 1007 aaPredicted RBP11.58□□□□□ -0.56
NLRP3-203ENST00000366496 UBE2Q2Q8WVN8 375 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms