Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC092960.1-201ENST00000604762 351 ntBASIC9.5□□□□□ -0.89
COL15A1P39059 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC9.5□□□□□ -0.89
COL15A1P39059 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC9.5□□□□□ -0.89
COL15A1P39059 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC9.5□□□□□ -0.89
COL15A1P39059 GUCY2GP-201ENST00000479705 3222 ntBASIC9.49□□□□□ -0.89
COL15A1P39059 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC9.49□□□□□ -0.89
COL15A1P39059 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
COL15A1P39059 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC9.49□□□□□ -0.89
COL15A1P39059 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
COL15A1P39059 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
COL15A1P39059 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
COL15A1P39059 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
COL15A1P39059 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
COL15A1P39059 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
COL15A1P39059 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC9.49□□□□□ -0.89
COL15A1P39059 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
COL15A1P39059 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC9.49□□□□□ -0.89
COL15A1P39059 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC9.49□□□□□ -0.89
COL15A1P39059 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
COL15A1P39059 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
COL15A1P39059 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
COL15A1P39059 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
COL15A1P39059 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
COL15A1P39059 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC9.49□□□□□ -0.89
COL15A1P39059 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
COL15A1P39059 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC9.49□□□□□ -0.89
COL15A1P39059 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
COL15A1P39059 AL078621.1-201ENST00000272567 768 ntBASIC9.49□□□□□ -0.89
COL15A1P39059 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
COL15A1P39059 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
COL15A1P39059 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
COL15A1P39059 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC9.49□□□□□ -0.89
COL15A1P39059 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC9.49□□□□□ -0.89
COL15A1P39059 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
COL15A1P39059 AC126615.1-201ENST00000470084 630 ntBASIC9.49□□□□□ -0.89
COL15A1P39059 AC114940.1-201ENST00000512162 1265 ntBASIC9.49□□□□□ -0.89
COL15A1P39059 IGHVII-51-2-201ENST00000519778 259 ntBASIC9.49□□□□□ -0.89
COL15A1P39059 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC9.49□□□□□ -0.89
COL15A1P39059 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC9.49□□□□□ -0.89
COL15A1P39059 CRADD-210ENST00000552033 622 ntTSL 3 BASIC9.49□□□□□ -0.89
COL15A1P39059 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
COL15A1P39059 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC9.49□□□□□ -0.89
COL15A1P39059 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC9.49□□□□□ -0.89
COL15A1P39059 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC9.49□□□□□ -0.89
COL15A1P39059 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC9.49□□□□□ -0.89
COL15A1P39059 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC9.49□□□□□ -0.89
COL15A1P39059 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
COL15A1P39059 RBM5-AS1-201ENST00000630404 1386 ntBASIC9.48□□□□□ -0.89
COL15A1P39059 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
COL15A1P39059 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
COL15A1P39059 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC9.48□□□□□ -0.89
COL15A1P39059 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
COL15A1P39059 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
COL15A1P39059 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC9.48□□□□□ -0.89
COL15A1P39059 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC9.48□□□□□ -0.89
COL15A1P39059 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
COL15A1P39059 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
COL15A1P39059 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
COL15A1P39059 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
COL15A1P39059 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
COL15A1P39059 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
COL15A1P39059 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
COL15A1P39059 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
COL15A1P39059 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
COL15A1P39059 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC9.48□□□□□ -0.89
COL15A1P39059 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
COL15A1P39059 MEG8-201ENST00000414488 800 ntTSL 3 BASIC9.48□□□□□ -0.89
COL15A1P39059 NRIR-202ENST00000414795 506 ntTSL 3 BASIC9.48□□□□□ -0.89
COL15A1P39059 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC9.48□□□□□ -0.89
COL15A1P39059 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC9.48□□□□□ -0.89
COL15A1P39059 AL024493.1-201ENST00000449217 833 ntBASIC9.48□□□□□ -0.89
COL15A1P39059 AL390026.1-201ENST00000456647 457 ntBASIC9.48□□□□□ -0.89
COL15A1P39059 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
COL15A1P39059 AC084878.1-201ENST00000480555 648 ntBASIC9.48□□□□□ -0.89
COL15A1P39059 RN7SL332P-201ENST00000482163 254 ntBASIC9.48□□□□□ -0.89
COL15A1P39059 OR7E163P-201ENST00000505943 894 ntBASIC9.48□□□□□ -0.89
COL15A1P39059 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC9.48□□□□□ -0.89
COL15A1P39059 SCARNA20.1-201ENST00000516009 138 ntBASIC9.48□□□□□ -0.89
COL15A1P39059 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC9.48□□□□□ -0.89
COL15A1P39059 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC9.48□□□□□ -0.89
COL15A1P39059 RN7SL32P-201ENST00000580514 281 ntBASIC9.48□□□□□ -0.89
COL15A1P39059 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
COL15A1P39059 SNORA43.5-201ENST00000631270 138 ntBASIC9.48□□□□□ -0.89
COL15A1P39059 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
COL15A1P39059 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
COL15A1P39059 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
COL15A1P39059 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
COL15A1P39059 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
COL15A1P39059 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
COL15A1P39059 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
COL15A1P39059 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
COL15A1P39059 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
COL15A1P39059 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
COL15A1P39059 APP-209ENST00000440126 2846 ntTSL 2 BASIC9.47□□□□□ -0.89
COL15A1P39059 MAPK10-347ENST00000641762 2856 ntBASIC9.47□□□□□ -0.89
COL15A1P39059 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
COL15A1P39059 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
COL15A1P39059 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
COL15A1P39059 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC9.47□□□□□ -0.89
COL15A1P39059 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms