Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 RN7SL14P-201ENST00000579715 298 ntBASIC8.28□□□□□ -1.08
UBE4BO95155 MIR5192-201ENST00000579892 92 ntBASIC8.28□□□□□ -1.08
UBE4BO95155 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC8.28□□□□□ -1.08
UBE4BO95155 AC007136.1-201ENST00000589141 199 ntBASIC8.28□□□□□ -1.08
UBE4BO95155 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE4BO95155 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
UBE4BO95155 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
UBE4BO95155 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8.27□□□□□ -1.08
UBE4BO95155 RPL12P38-202ENST00000588627 2319 ntBASIC8.27□□□□□ -1.08
UBE4BO95155 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.27□□□□□ -1.08
UBE4BO95155 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC8.27□□□□□ -1.08
UBE4BO95155 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
UBE4BO95155 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.08
UBE4BO95155 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
UBE4BO95155 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.27□□□□□ -1.09
UBE4BO95155 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.27□□□□□ -1.09
UBE4BO95155 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
UBE4BO95155 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.27□□□□□ -1.09
UBE4BO95155 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC8.27□□□□□ -1.09
UBE4BO95155 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC8.27□□□□□ -1.09
UBE4BO95155 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC8.27□□□□□ -1.09
UBE4BO95155 Z83313.1-201ENST00000433780 718 ntBASIC8.27□□□□□ -1.09
UBE4BO95155 RPL5P4-201ENST00000434805 886 ntBASIC8.27□□□□□ -1.09
UBE4BO95155 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC8.27□□□□□ -1.09
UBE4BO95155 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC8.27□□□□□ -1.09
UBE4BO95155 LIN28AP2-201ENST00000445283 458 ntBASIC8.27□□□□□ -1.09
UBE4BO95155 SS18L2P1-201ENST00000445923 213 ntBASIC8.27□□□□□ -1.09
UBE4BO95155 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC8.27□□□□□ -1.09
UBE4BO95155 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC8.27□□□□□ -1.09
UBE4BO95155 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC8.27□□□□□ -1.09
UBE4BO95155 RN7SL338P-201ENST00000481467 293 ntBASIC8.27□□□□□ -1.09
UBE4BO95155 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC8.27□□□□□ -1.09
UBE4BO95155 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 AC008677.3-201ENST00000519146 666 ntBASIC8.27□□□□□ -1.09
UBE4BO95155 OR7E1P-201ENST00000533891 958 ntBASIC8.27□□□□□ -1.09
UBE4BO95155 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC8.27□□□□□ -1.09
UBE4BO95155 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC8.27□□□□□ -1.09
UBE4BO95155 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC8.27□□□□□ -1.09
UBE4BO95155 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 AC104117.5-201ENST00000606195 547 ntBASIC8.27□□□□□ -1.09
UBE4BO95155 U47924.1-201ENST00000606539 434 ntBASIC8.27□□□□□ -1.09
UBE4BO95155 AP004247.4-201ENST00000608484 942 ntBASIC8.27□□□□□ -1.09
UBE4BO95155 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.27□□□□□ -1.09
UBE4BO95155 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
UBE4BO95155 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.26□□□□□ -1.09
UBE4BO95155 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.26□□□□□ -1.09
UBE4BO95155 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
UBE4BO95155 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 AC023818.2-201ENST00000623817 2304 ntBASIC8.26□□□□□ -1.09
UBE4BO95155 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 TRIM60P14-201ENST00000513444 1419 ntBASIC8.26□□□□□ -1.09
UBE4BO95155 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 SNORA2C-201ENST00000408564 137 ntBASIC8.26□□□□□ -1.09
UBE4BO95155 HBBP1-201ENST00000433329 439 ntBASIC8.26□□□□□ -1.09
UBE4BO95155 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.26□□□□□ -1.09
UBE4BO95155 AC005040.1-201ENST00000437783 482 ntBASIC8.26□□□□□ -1.09
UBE4BO95155 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
UBE4BO95155 AC012493.1-201ENST00000453252 760 ntBASIC8.26□□□□□ -1.09
UBE4BO95155 AC008799.2-201ENST00000484429 647 ntBASIC8.26□□□□□ -1.09
UBE4BO95155 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC8.26□□□□□ -1.09
UBE4BO95155 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
UBE4BO95155 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC8.26□□□□□ -1.09
UBE4BO95155 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC8.26□□□□□ -1.09
UBE4BO95155 OR7E2P-201ENST00000533071 889 ntBASIC8.26□□□□□ -1.09
UBE4BO95155 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC8.26□□□□□ -1.09
UBE4BO95155 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC8.26□□□□□ -1.09
UBE4BO95155 IGHV1OR15-3-201ENST00000564926 351 ntBASIC8.26□□□□□ -1.09
UBE4BO95155 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms