RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
VSIG1-201ENST00000217957 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
VSIG1-201ENST00000217957 EHMT2Q96KQ7 1210 aa19.19■□□□□ 0.66
VSIG1-201ENST00000217957 SLC24A1O60721 1099 aa19.13■□□□□ 0.65
VSIG1-201ENST00000217957 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
VSIG1-201ENST00000217957 PLPPR3Q6T4P5 718 aa18.36■□□□□ 0.53
VSIG1-201ENST00000217957 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
VSIG1-201ENST00000217957 KCNA4P22459 653 aa17.82■□□□□ 0.44
VSIG1-201ENST00000217957 CSRNP3Q8WYN3 585 aa17.73■□□□□ 0.43
VSIG1-201ENST00000217957 AMER1Q5JTC6 1135 aaPredicted RBP17.16■□□□□ 0.34
VSIG1-201ENST00000217957 PRKCSHP14314 528 aaPredicted RBP17.08■□□□□ 0.32
VSIG1-201ENST00000217957 ADRA2BP18089 450 aa17.02■□□□□ 0.32
VSIG1-201ENST00000217957 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
VSIG1-201ENST00000217957 NCBP3Q53F19 620 aaKnown RBP16.89■□□□□ 0.29
VSIG1-201ENST00000217957 DAXXQ9UER7 740 aaPredicted RBP16.62■□□□□ 0.25
VSIG1-201ENST00000217957 ZBTB22O15209 634 aa16.58■□□□□ 0.24
VSIG1-201ENST00000217957 TIMELESSQ9UNS1 1208 aa16.39■□□□□ 0.21
VSIG1-201ENST00000217957 TAOK2Q9UL54 1235 aa16.28■□□□□ 0.2
VSIG1-201ENST00000217957 TULP1O00294 542 aaPredicted RBP16.19■□□□□ 0.18
VSIG1-201ENST00000217957 TPRNQ4KMQ1 711 aa16.16■□□□□ 0.18
VSIG1-201ENST00000217957 PPP6R1Q9UPN7 881 aa16.15■□□□□ 0.18
VSIG1-201ENST00000217957 NPM3O75607 178 aaKnown RBP16.02■□□□□ 0.15
VSIG1-201ENST00000217957 HAP1P54257 671 aaPredicted RBP16■□□□□ 0.15
VSIG1-201ENST00000217957 PLCB2Q00722 1185 aa16■□□□□ 0.15
VSIG1-201ENST00000217957 BCANQ96GW7 911 aa15.98■□□□□ 0.15
VSIG1-201ENST00000217957 FKBP8Q14318 412 aa15.96■□□□□ 0.15
VSIG1-201ENST00000217957 SENP3Q9H4L4 574 aaPredicted RBP15.88■□□□□ 0.13
VSIG1-201ENST00000217957 ARXQ96QS3 562 aa15.86■□□□□ 0.13
VSIG1-201ENST00000217957 PPP4R3CPQ6ZMV5 832 aa15.75■□□□□ 0.11
VSIG1-201ENST00000217957 DCAF8L2P0C7V8 631 aa15.54■□□□□ 0.08
VSIG1-201ENST00000217957 GTF3C3Q9Y5Q9 886 aa15.54■□□□□ 0.08
VSIG1-201ENST00000217957 HOMEZQ8IX15 550 aa15.52■□□□□ 0.08
VSIG1-201ENST00000217957 FBLN2P98095 1184 aa15.51■□□□□ 0.07
VSIG1-201ENST00000217957 KDM2AQ9Y2K7 1162 aa15.5■□□□□ 0.07
VSIG1-201ENST00000217957 PODXL2Q9NZ53 605 aa15.48■□□□□ 0.07
VSIG1-201ENST00000217957 KLHL34Q8N239 644 aa15.42■□□□□ 0.06
VSIG1-201ENST00000217957 FOXD4L1Q9NU39 408 aa15.4■□□□□ 0.06
VSIG1-201ENST00000217957 RANGAP1P46060 587 aaPredicted RBP15.35■□□□□ 0.05
VSIG1-201ENST00000217957 CCDC180Q9P1Z9 1646 aa15.33■□□□□ 0.05
VSIG1-201ENST00000217957 NISCHQ9Y2I1 1504 aa15.27■□□□□ 0.03
VSIG1-201ENST00000217957 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
VSIG1-201ENST00000217957 VSIG10Q8N0Z9 540 aa15.23■□□□□ 0.03
VSIG1-201ENST00000217957 TMEM132AQ24JP5 1023 aa15.19■□□□□ 0.02
VSIG1-201ENST00000217957 SUPT5HO00267 1087 aaKnown RBP15.17■□□□□ 0.02
VSIG1-201ENST00000217957 C14orf37Q86TY3 774 aa15.16■□□□□ 0.02
VSIG1-201ENST00000217957 SHROOM4Q9ULL8 1493 aa15.1■□□□□ 0.01
VSIG1-201ENST00000217957 APLP2Q06481 763 aa15.02□□□□□ -0.01
VSIG1-201ENST00000217957 FOXD1Q16676 465 aa15□□□□□ -0.01
VSIG1-201ENST00000217957 CFAP44Q96MT7 982 aa14.97□□□□□ -0.01
VSIG1-201ENST00000217957 NPM2Q86SE8 214 aaKnown RBP14.93□□□□□ -0.02
VSIG1-201ENST00000217957 TRIM26Q12899 539 aaPredicted RBP14.93□□□□□ -0.02
VSIG1-201ENST00000217957 PAXIP1Q6ZW49 1069 aaPredicted RBP14.92□□□□□ -0.02
VSIG1-201ENST00000217957 UBTFP17480 764 aaKnown RBP14.92□□□□□ -0.02
VSIG1-201ENST00000217957 TSHZ2Q9NRE2 1034 aa14.85□□□□□ -0.03
VSIG1-201ENST00000217957 NPM1P06748 294 aaKnown RBP eCLIP14.76□□□□□ -0.05
VSIG1-201ENST00000217957 PKD2Q13563 968 aa14.73□□□□□ -0.05
VSIG1-201ENST00000217957 HRCP23327 699 aa14.7□□□□□ -0.06
VSIG1-201ENST00000217957 NBR1Q14596 966 aa14.7□□□□□ -0.06
VSIG1-201ENST00000217957 ERICH6Q7L0X2 663 aa14.66□□□□□ -0.06
VSIG1-201ENST00000217957 CNKSR2Q8WXI2 1034 aa14.64□□□□□ -0.07
VSIG1-201ENST00000217957 PELP1Q8IZL8 1130 aaKnown RBP14.61□□□□□ -0.07
VSIG1-201ENST00000217957 PIAS4Q8N2W9 510 aaPredicted RBP14.6□□□□□ -0.07
VSIG1-201ENST00000217957 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.58□□□□□ -0.07
VSIG1-201ENST00000217957 TRHP20396 242 aaPredicted RBP14.58□□□□□ -0.08
VSIG1-201ENST00000217957 IFNLR1Q8IU57 520 aaPredicted RBP14.56□□□□□ -0.08
VSIG1-201ENST00000217957 SLC4A2P04920 1241 aa14.54□□□□□ -0.08
VSIG1-201ENST00000217957 MYO15BQ96JP2 1530 aa14.52□□□□□ -0.08
VSIG1-201ENST00000217957 RB1CC1Q8TDY2 1594 aa14.52□□□□□ -0.09
VSIG1-201ENST00000217957 LOC105371045A0A1W2PR82 267 aa14.46□□□□□ -0.09
VSIG1-201ENST00000217957 ARID3AQ99856 593 aa14.45□□□□□ -0.1
VSIG1-201ENST00000217957 BBXQ8WY36 941 aaPredicted RBP14.44□□□□□ -0.1
VSIG1-201ENST00000217957 CUX2O14529 1486 aa14.43□□□□□ -0.1
VSIG1-201ENST00000217957 VASPP50552 380 aaPredicted RBP14.41□□□□□ -0.1
VSIG1-201ENST00000217957 EIF5BO60841 1220 aaKnown RBP14.39□□□□□ -0.11
VSIG1-201ENST00000217957 NACADO15069 1562 aa14.37□□□□□ -0.11
VSIG1-201ENST00000217957 ATF5Q9Y2D1 282 aaPredicted RBP14.37□□□□□ -0.11
VSIG1-201ENST00000217957 SPRYD3Q8NCJ5 442 aa14.34□□□□□ -0.11
VSIG1-201ENST00000217957 FBXO3Q9UK99 471 aa14.31□□□□□ -0.12
VSIG1-201ENST00000217957 MAPK8IP2Q13387 824 aaPredicted RBP14.29□□□□□ -0.12
VSIG1-201ENST00000217957 TTBK1Q5TCY1 1321 aaPredicted RBP14.28□□□□□ -0.12
VSIG1-201ENST00000217957 ABCC9O60706 1549 aa14.24□□□□□ -0.13
VSIG1-201ENST00000217957 RGL2O15211 777 aa14.24□□□□□ -0.13
VSIG1-201ENST00000217957 PLEKHG5O94827 1062 aa14.22□□□□□ -0.13
VSIG1-201ENST00000217957 ATXN8OSP0DMR3 200 aa14.21□□□□□ -0.14
VSIG1-201ENST00000217957 BRPF1P55201 1214 aaPredicted RBP14.2□□□□□ -0.14
VSIG1-201ENST00000217957 ECM2O94769 699 aaPredicted RBP14.19□□□□□ -0.14
VSIG1-201ENST00000217957 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
VSIG1-201ENST00000217957 MYT1Q01538 1121 aa14.13□□□□□ -0.15
VSIG1-201ENST00000217957 CHGAP10645 457 aaKnown RBP14.11□□□□□ -0.15
VSIG1-201ENST00000217957 IGSF3O75054 1194 aa14.08□□□□□ -0.16
VSIG1-201ENST00000217957 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.16
VSIG1-201ENST00000217957 C1orf115Q9H7X2 142 aa14.07□□□□□ -0.16
VSIG1-201ENST00000217957 ARID3CA6NKF2 412 aa14.04□□□□□ -0.16
VSIG1-201ENST00000217957 NECTIN2Q92692 538 aa14.04□□□□□ -0.16
VSIG1-201ENST00000217957 UNC13AQ9UPW8 1703 aa14.03□□□□□ -0.16
VSIG1-201ENST00000217957 NEUROD2Q15784 382 aa13.99□□□□□ -0.17
VSIG1-201ENST00000217957 SPDYE4A6NLX3 237 aa13.97□□□□□ -0.17
VSIG1-201ENST00000217957 ZNF428Q96B54 188 aa13.9□□□□□ -0.18
VSIG1-201ENST00000217957 CCDC9Q9Y3X0 531 aaKnown RBP13.9□□□□□ -0.18
VSIG1-201ENST00000217957 SCAF1Q9H7N4 1312 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms