Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RN7SL612P-201ENST00000497704 295 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC8.11□□□□□ -1.11
MTHFRP42898 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC8.11□□□□□ -1.11
MTHFRP42898 AC021001.1-201ENST00000518703 987 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 FLJ46284-202ENST00000521148 496 ntTSL 3 BASIC8.11□□□□□ -1.11
MTHFRP42898 AP006296.1-201ENST00000537438 499 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC8.11□□□□□ -1.11
MTHFRP42898 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC8.11□□□□□ -1.11
MTHFRP42898 MIR3680-2-201ENST00000578247 87 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 MIR3680-1-201ENST00000581433 87 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC8.11□□□□□ -1.11
MTHFRP42898 AC006116.6-201ENST00000593258 1103 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.11□□□□□ -1.11
MTHFRP42898 AC010538.1-201ENST00000615131 663 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 AC007347.2-201ENST00000623044 180 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
MTHFRP42898 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
MTHFRP42898 XRCC6P5-201ENST00000435236 1795 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC8.11□□□□□ -1.11
MTHFRP42898 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC8.11□□□□□ -1.11
MTHFRP42898 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 SND1-IT1-201ENST00000623342 2481 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
MTHFRP42898 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 EEF1A1P16-201ENST00000325349 1414 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 CYP2C19-202ENST00000480405 1417 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8.11□□□□□ -1.11
MTHFRP42898 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC8.11□□□□□ -1.11
MTHFRP42898 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
MTHFRP42898 CDY3P-201ENST00000454543 1618 ntBASIC8.11□□□□□ -1.11
MTHFRP42898 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MTHFRP42898 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
MTHFRP42898 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MTHFRP42898 TTC3P1-201ENST00000399586 6081 ntBASIC8.1□□□□□ -1.11
MTHFRP42898 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
MTHFRP42898 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC8.1□□□□□ -1.11
MTHFRP42898 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
MTHFRP42898 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC8.1□□□□□ -1.11
MTHFRP42898 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC8.1□□□□□ -1.11
MTHFRP42898 LINC02128-205ENST00000641755 1334 ntBASIC8.1□□□□□ -1.11
MTHFRP42898 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
MTHFRP42898 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
MTHFRP42898 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MTHFRP42898 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.1□□□□□ -1.11
MTHFRP42898 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
MTHFRP42898 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC8.1□□□□□ -1.11
MTHFRP42898 U3.48-201ENST00000363172 216 ntBASIC8.1□□□□□ -1.11
MTHFRP42898 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MTHFRP42898 NPM1P31-201ENST00000399021 764 ntBASIC8.1□□□□□ -1.11
MTHFRP42898 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.1□□□□□ -1.11
MTHFRP42898 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC8.1□□□□□ -1.11
MTHFRP42898 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC8.1□□□□□ -1.11
MTHFRP42898 AL161454.1-201ENST00000446226 569 ntBASIC8.1□□□□□ -1.11
MTHFRP42898 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
MTHFRP42898 RN7SL259P-201ENST00000478499 253 ntBASIC8.1□□□□□ -1.11
MTHFRP42898 AC017007.3-201ENST00000479865 435 ntBASIC8.1□□□□□ -1.11
MTHFRP42898 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC8.1□□□□□ -1.11
MTHFRP42898 FDPSP3-201ENST00000556903 1013 ntBASIC8.1□□□□□ -1.11
MTHFRP42898 FAM30C-201ENST00000561158 410 ntBASIC8.1□□□□□ -1.11
MTHFRP42898 UBE2CP4-201ENST00000561405 535 ntBASIC8.1□□□□□ -1.11
MTHFRP42898 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
MTHFRP42898 FCGR1CP-201ENST00000579737 1127 ntBASIC8.1□□□□□ -1.11
MTHFRP42898 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC8.1□□□□□ -1.11
MTHFRP42898 OR7E19P-202ENST00000589942 844 ntBASIC8.1□□□□□ -1.11
MTHFRP42898 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.1□□□□□ -1.11
MTHFRP42898 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC8.1□□□□□ -1.11
MTHFRP42898 AC026336.5-201ENST00000624455 738 ntBASIC8.1□□□□□ -1.11
MTHFRP42898 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
MTHFRP42898 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
MTHFRP42898 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
MTHFRP42898 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MTHFRP42898 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
MTHFRP42898 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
MTHFRP42898 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC8.1□□□□□ -1.11
MTHFRP42898 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC8.1□□□□□ -1.11
MTHFRP42898 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MTHFRP42898 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
MTHFRP42898 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MTHFRP42898 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC8.09□□□□□ -1.11
MTHFRP42898 TRIM53BP-201ENST00000532912 1720 ntBASIC8.09□□□□□ -1.11
MTHFRP42898 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
MTHFRP42898 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
MTHFRP42898 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
MTHFRP42898 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC8.09□□□□□ -1.11
MTHFRP42898 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
MTHFRP42898 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
MTHFRP42898 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
MTHFRP42898 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
MTHFRP42898 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms