Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 LINC01808-203ENST00000641932 1643 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 RPL5P5-201ENST00000392009 893 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 HNRNPCP2-201ENST00000399515 881 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 VN1R33P-201ENST00000411800 887 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 AC231533.2-201ENST00000419045 978 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 RPL5P34-201ENST00000426545 891 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 HBBP1-201ENST00000433329 439 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 RPL5P9-201ENST00000448118 886 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 RN7SL233P-201ENST00000469988 277 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 AC127024.1-201ENST00000490847 418 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 IGKV2-29-201ENST00000521304 372 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 AC093283.1-201ENST00000565306 1075 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 AC005495.1-201ENST00000586611 1211 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 MIR7162-201ENST00000611134 69 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 EEF1A1P26-201ENST00000458319 1363 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 AL391380.1-201ENST00000439300 1432 ntBASIC8.04□□□□□ -1.12
LMO3Q8TAP4 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 OR2A20P-201ENST00000479887 2913 ntBASIC8.04□□□□□ -1.12
LMO3Q8TAP4 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 RBMX2P2-201ENST00000257020 946 ntBASIC8.04□□□□□ -1.12
LMO3Q8TAP4 AL078621.1-201ENST00000272567 768 ntBASIC8.04□□□□□ -1.12
LMO3Q8TAP4 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 RPL5P28-201ENST00000418634 693 ntBASIC8.04□□□□□ -1.12
LMO3Q8TAP4 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 RPSAP49-201ENST00000445182 886 ntBASIC8.04□□□□□ -1.12
LMO3Q8TAP4 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 AC022730.2-201ENST00000465359 452 ntBASIC8.04□□□□□ -1.12
LMO3Q8TAP4 AC095059.2-201ENST00000510601 933 ntBASIC8.04□□□□□ -1.12
LMO3Q8TAP4 AP006437.1-202ENST00000530327 933 ntBASIC8.04□□□□□ -1.12
LMO3Q8TAP4 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMO3Q8TAP4 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 FGG-204ENST00000405164 1539 ntTSL 5 BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 AL133320.1-201ENST00000621423 2352 ntBASIC8.03□□□□□ -1.12
LMO3Q8TAP4 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 NF1P8-201ENST00000415351 1461 ntBASIC8.03□□□□□ -1.12
LMO3Q8TAP4 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMO3Q8TAP4 RNA5SP297-201ENST00000391029 113 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms