Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC073488.7-201ENST00000633785 778 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
COL15A1P39059 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC9.63□□□□□ -0.87
COL15A1P39059 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC9.63□□□□□ -0.87
COL15A1P39059 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC9.63□□□□□ -0.87
COL15A1P39059 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 ERG-210ENST00000442448 5034 ntTSL 5 BASIC9.63□□□□□ -0.87
COL15A1P39059 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC9.63□□□□□ -0.87
COL15A1P39059 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC9.63□□□□□ -0.87
COL15A1P39059 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
COL15A1P39059 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC9.63□□□□□ -0.87
COL15A1P39059 RN7SKP36-201ENST00000363997 312 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 AL662791.3-201ENST00000413771 776 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC9.63□□□□□ -0.87
COL15A1P39059 AC013403.1-201ENST00000436954 263 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 AL451074.4-201ENST00000447545 470 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 AC005517.1-201ENST00000452091 489 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 DKK2-202ENST00000510463 908 ntTSL 3 BASIC9.63□□□□□ -0.87
COL15A1P39059 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC9.63□□□□□ -0.87
COL15A1P39059 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC9.63□□□□□ -0.87
COL15A1P39059 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC9.63□□□□□ -0.87
COL15A1P39059 RAB30-209ENST00000532548 644 ntTSL 3 BASIC9.63□□□□□ -0.87
COL15A1P39059 AC016629.2-201ENST00000597341 199 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC9.63□□□□□ -0.87
COL15A1P39059 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC9.63□□□□□ -0.87
COL15A1P39059 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
COL15A1P39059 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
COL15A1P39059 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC9.62□□□□□ -0.87
COL15A1P39059 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
COL15A1P39059 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
COL15A1P39059 AF121897.1-201ENST00000411867 3980 ntBASIC9.62□□□□□ -0.87
COL15A1P39059 SAMMSON-203ENST00000641005 2168 ntBASIC9.62□□□□□ -0.87
COL15A1P39059 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
COL15A1P39059 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
COL15A1P39059 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
COL15A1P39059 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC9.62□□□□□ -0.87
COL15A1P39059 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
COL15A1P39059 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
COL15A1P39059 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
COL15A1P39059 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
COL15A1P39059 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC9.62□□□□□ -0.87
COL15A1P39059 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
COL15A1P39059 NPIPA1-201ENST00000328085 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
COL15A1P39059 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
COL15A1P39059 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
COL15A1P39059 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC9.62□□□□□ -0.87
COL15A1P39059 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
COL15A1P39059 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC9.62□□□□□ -0.87
COL15A1P39059 AL590143.1-201ENST00000405071 138 ntBASIC9.62□□□□□ -0.87
COL15A1P39059 SNORA2C-201ENST00000408564 137 ntBASIC9.62□□□□□ -0.87
COL15A1P39059 AL390856.1-201ENST00000412174 628 ntTSL 2 BASIC9.62□□□□□ -0.87
COL15A1P39059 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC9.62□□□□□ -0.87
COL15A1P39059 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC9.62□□□□□ -0.87
COL15A1P39059 AKR1B10P1-201ENST00000425765 942 ntBASIC9.62□□□□□ -0.87
COL15A1P39059 RPL29P7-201ENST00000440227 457 ntBASIC9.62□□□□□ -0.87
COL15A1P39059 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC9.62□□□□□ -0.87
COL15A1P39059 RN7SL152P-201ENST00000484176 298 ntBASIC9.62□□□□□ -0.87
COL15A1P39059 GAPDHP61-201ENST00000507324 1005 ntBASIC9.62□□□□□ -0.87
COL15A1P39059 AC107952.1-201ENST00000524200 376 ntBASIC9.62□□□□□ -0.87
COL15A1P39059 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC9.62□□□□□ -0.87
COL15A1P39059 HMGN1P26-201ENST00000558737 303 ntBASIC9.62□□□□□ -0.87
COL15A1P39059 AC061975.3-201ENST00000583209 244 ntBASIC9.62□□□□□ -0.87
COL15A1P39059 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC9.62□□□□□ -0.87
COL15A1P39059 AL121782.1-201ENST00000611242 413 ntBASIC9.62□□□□□ -0.87
COL15A1P39059 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
COL15A1P39059 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC9.62□□□□□ -0.87
COL15A1P39059 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
COL15A1P39059 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
COL15A1P39059 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
COL15A1P39059 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
COL15A1P39059 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
COL15A1P39059 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC9.61□□□□□ -0.87
COL15A1P39059 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
COL15A1P39059 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC9.61□□□□□ -0.87
COL15A1P39059 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC9.61□□□□□ -0.87
COL15A1P39059 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC9.61□□□□□ -0.87
COL15A1P39059 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
COL15A1P39059 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
COL15A1P39059 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC9.61□□□□□ -0.87
COL15A1P39059 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC9.61□□□□□ -0.87
COL15A1P39059 AC020904.2-202ENST00000614660 1401 ntBASIC9.61□□□□□ -0.87
COL15A1P39059 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
COL15A1P39059 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
COL15A1P39059 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
COL15A1P39059 AC009362.1-201ENST00000427253 406 ntBASIC9.61□□□□□ -0.87
COL15A1P39059 DBIL5P2-201ENST00000443827 253 ntBASIC9.61□□□□□ -0.87
COL15A1P39059 AL031736.1-201ENST00000449688 618 ntBASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms