Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 BX842568.3-201ENST00000418104 571 ntBASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.83■□□□□ 0.61
COMMD3-BMI1R4GMX3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COMMD3-BMI1R4GMX3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.83■□□□□ 0.61
COMMD3-BMI1R4GMX3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
COMMD3-BMI1R4GMX3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COMMD3-BMI1R4GMX3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
COMMD3-BMI1R4GMX3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.83■□□□□ 0.61
COMMD3-BMI1R4GMX3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COMMD3-BMI1R4GMX3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COMMD3-BMI1R4GMX3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.83■□□□□ 0.61
COMMD3-BMI1R4GMX3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.83■□□□□ 0.61
COMMD3-BMI1R4GMX3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
COMMD3-BMI1R4GMX3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD3-BMI1R4GMX3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.83■□□□□ 0.6
COMMD3-BMI1R4GMX3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
COMMD3-BMI1R4GMX3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD3-BMI1R4GMX3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD3-BMI1R4GMX3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
COMMD3-BMI1R4GMX3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD3-BMI1R4GMX3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.83■□□□□ 0.6
COMMD3-BMI1R4GMX3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD3-BMI1R4GMX3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD3-BMI1R4GMX3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD3-BMI1R4GMX3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.83■□□□□ 0.6
COMMD3-BMI1R4GMX3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
COMMD3-BMI1R4GMX3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 UNC93B3-201ENST00000308076 687 ntBASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 AP006587.3-201ENST00000525742 1516 ntBASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD3-BMI1R4GMX3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD3-BMI1R4GMX3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms