Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 AL162430.1-201ENST00000480705 870 ntBASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF11Q9Y3C5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 DPP3P2-201ENST00000416030 1696 ntBASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 AC006015.1-201ENST00000429970 570 ntBASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 DUX4L16-201ENST00000555130 1264 ntBASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RNF11Q9Y3C5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF11Q9Y3C5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF11Q9Y3C5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF11Q9Y3C5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF11Q9Y3C5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF11Q9Y3C5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF11Q9Y3C5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
RNF11Q9Y3C5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF11Q9Y3C5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF11Q9Y3C5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF11Q9Y3C5 CNN2P6-201ENST00000439038 900 ntBASIC19.58■□□□□ 0.72
RNF11Q9Y3C5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF11Q9Y3C5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RNF11Q9Y3C5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RNF11Q9Y3C5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF11Q9Y3C5 CYP21A1P-202ENST00000354927 1481 ntBASIC19.58■□□□□ 0.72
RNF11Q9Y3C5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF11Q9Y3C5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF11Q9Y3C5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF11Q9Y3C5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF11Q9Y3C5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF11Q9Y3C5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 AL162412.1-201ENST00000567129 965 ntBASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 MIR5787-201ENST00000611784 55 ntBASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 AL356652.1-201ENST00000615962 565 ntBASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 AC087633.2-202ENST00000565166 1439 ntBASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF11Q9Y3C5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF11Q9Y3C5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms