Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 AC123595.1-201ENST00000440769 1046 ntBASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 BX323043.1-201ENST00000641006 1765 ntBASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 AC104187.1-201ENST00000607510 612 ntBASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 RARRES2P11-201ENST00000635158 484 ntBASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PCDHGB4Q9UN71 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 HCG11-201ENST00000411553 5696 ntBASIC19.42■□□□□ 0.7
PCDHGB4Q9UN71 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 AP001160.3-201ENST00000601484 763 ntBASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGB4Q9UN71 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 AC116050.2-201ENST00000612102 1779 ntBASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB4Q9UN71 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms