Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACSIN3Q9UKS6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PACSIN3Q9UKS6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.44■□□□□ 0.7
PACSIN3Q9UKS6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PACSIN3Q9UKS6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACSIN3Q9UKS6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.44■□□□□ 0.7
PACSIN3Q9UKS6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.44■□□□□ 0.7
PACSIN3Q9UKS6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACSIN3Q9UKS6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.44■□□□□ 0.7
PACSIN3Q9UKS6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACSIN3Q9UKS6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PACSIN3Q9UKS6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.44■□□□□ 0.7
PACSIN3Q9UKS6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PACSIN3Q9UKS6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 AC009237.3-201ENST00000393279 1427 ntBASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 LINC02228-203ENST00000641970 1355 ntBASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACSIN3Q9UKS6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PACSIN3Q9UKS6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 AC005224.4-201ENST00000583262 1652 ntBASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 DUX4L2-201ENST00000561772 1275 ntBASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 DUX4L6-201ENST00000626483 1275 ntBASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 DUX4L1-201ENST00000627662 1275 ntBASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 DUX4L8-201ENST00000629013 1275 ntBASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 DUX4L3-201ENST00000630187 1275 ntBASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 DUX4L7-201ENST00000630678 1275 ntBASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 DUX4L5-201ENST00000630834 1275 ntBASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PACSIN3Q9UKS6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms